Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3763 |
Symbol | |
ID | 4020325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4529486 |
End bp | 4531375 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637957827 |
Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
Protein accession | YP_564759 |
Protein GI | 91795108 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.223421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTTC ACGAAAGGTT TGATGTTATT GTTGTAGGTG GTGGTCATGC CGGAACTGAA GCGGCATTAG CGTCTGCAAG AATGGGTTCG AAAACGTTAC TGCTCACTCA CAACATAGAT ACGTTAGGGC AAATGTCTTG TAACCCAGCG ATCGGTGGGA TTGGTAAGGG CCATTTAGTC AAAGAGATCG ATGCTTTAGG TGGTGCTATG GCAATAGCCA CTGATTTCGC AGGCATACAA TTTAGAACCT TAAATTCGAG CAAAGGCCCA GCAGTGCGTG CAACCCGGGC ACAAGCGGAT CGCGCCTTGT ATCGTCAAAA AATCCAGCAA ATTTTACAAA GCCAACCAAA CTTACGTATT TTCCAACAAG CCGTTGATGA CTTAGTTGTT GAAAATAATC AAGTGGTTGG TGTGGTAACC CAAATGGGAT TGGCCTTTGA ATCACCAACG GTAGTGTTAA CCACAGGCAC GTTCTTAAGC GGTAAAATTC ATATTGGCAT GCAAAACTAC AGTGGCGGCC GTGCTGGCGA TCCACCGGCA ATTGCTTTAG CCAATCGACT ACGTGAATTG CCTATTCGTG TTGGACGCTT AAAAACCGGT ACACCACCTC GAATCGATGC CAACAGCATA GATTTCTCAC AAATGACTGA GCAAAAAGGC GATACTCCTT TGCCTGTGAT GTCGTTCGTT GGCAATGTAG ATCAACATCC GCGACAAATT TCGTGTCACA TCACCCATAC CAACGAGAAA ACTCACGATA TCATTCGTGG TGGACTAGAC AGAAGTCCTA TGTATTCAGG GGTTATTGAA GGTATTGGTC CAAGATACTG TCCATCAATT GAAGATAAAA TCCATCGCTT CGCCGATAAG ACTTCTCATC AAATATTTAT CGAACCTGAA GGCTTAAGCA CCAACGAAAT CTACCCTAAT GGTATTTCGA CTAGCTTGCC ATTTGATGTG CAATTGAATT TAGTCCGTTC AATCAAAGGC ATGGAAAACG CTGAGATTAT TCGCCCAGGC TATGCCATTG AATACGATTA TTTTGATCCT AGAGATCTTA AAAACTCGTT AGAAACCAAA ACCATTAATG GTTTGTTCTT TGCAGGACAA ATTAACGGCA CCACGGGCTA TGAAGAAGCC GGTGCTCAAG GTTTATTAGC CGGTATGAAT GCCTCCTTGC AAGTGCAAGG CAAAGAGACT TGGTGTCCAC GTCGGGATCA AGCCTATTTA GGGGTATTGG TTGACGATCT ATCCACCCTA GGGACTAAAG AACCCTACCG CATGTTCACC AGCCGCGCCG AGTACCGTTT GCTGTTACGT GAAGATAATG CTGATTTACG ATTAACTGAA AAAGGCCGCG AACTTGGCTT AGTCAATGAT GATCGCTGGG CTAAATTTAC CGAAAAGCGA GAGTCTATTG AACTTGAGCT ACAACGTTTA CGTGGTCAGT GGATCCACCC CAACTCACCT TTACTTGGAG TATTAAATCC TGAATTAAAT ACCCCTATTT CTCGTGAAGC ATCTTTTGAA GACTTATTAC GTCGTCCTGA AATGGACTAT CAGAAATTAA TGTCGTTAGA AGGATTTGGT CCGGGTCTTG AAGATCCTAG TGCAGCAGAG CAAGTGCAGA TACAGGTTAA ATATTCAGGT TATATTCAGC GTCAACAAGA TGAAATTGAT AAGGCTATTC GCCATGAAAA CTCCTTGTTG CCGCTCGATC TGGATTATCA AGAAGTCCCA GGGCTCTCTA ATGAAGTGAT AGCAAAATTG AATAACCACA AGCCAGATAC CATAGGCCAA GCATCACGGA TCTCGGGTAT TACCCCAGCG GCAATTTCAA TTTTACTAGT TCACCTTAAA AAGCGCGGTT TGCTACGCAA AACTGCTTAA
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Protein sequence | MHFHERFDVI VVGGGHAGTE AALASARMGS KTLLLTHNID TLGQMSCNPA IGGIGKGHLV KEIDALGGAM AIATDFAGIQ FRTLNSSKGP AVRATRAQAD RALYRQKIQQ ILQSQPNLRI FQQAVDDLVV ENNQVVGVVT QMGLAFESPT VVLTTGTFLS GKIHIGMQNY SGGRAGDPPA IALANRLREL PIRVGRLKTG TPPRIDANSI DFSQMTEQKG DTPLPVMSFV GNVDQHPRQI SCHITHTNEK THDIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFADK TSHQIFIEPE GLSTNEIYPN GISTSLPFDV QLNLVRSIKG MENAEIIRPG YAIEYDYFDP RDLKNSLETK TINGLFFAGQ INGTTGYEEA GAQGLLAGMN ASLQVQGKET WCPRRDQAYL GVLVDDLSTL GTKEPYRMFT SRAEYRLLLR EDNADLRLTE KGRELGLVND DRWAKFTEKR ESIELELQRL RGQWIHPNSP LLGVLNPELN TPISREASFE DLLRRPEMDY QKLMSLEGFG PGLEDPSAAE QVQIQVKYSG YIQRQQDEID KAIRHENSLL PLDLDYQEVP GLSNEVIAKL NNHKPDTIGQ ASRISGITPA AISILLVHLK KRGLLRKTA
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