| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3762 |
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| Symbol | gidB |
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| ID | 4020324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4528747 |
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| End bp | 4529373 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637957826 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_564758 |
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| Protein GI | 91795107 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.247019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTATCTT CCCAACTCAG TGCGTATTTA GCTGAAATGA ACCTATCGGC CACTGAGCAA
CAACAAGGCC AATTGGTTGG TTTTGTTGAA ATGCTAAATA AATGGAACAA GGCCTATAAC
CTCACCTCGG TTCGTTCACC TGAGCAGATG TTAATTCGTC ATGTGATGGA CAGTTTGACC
GTTTCTCCTT ATCTTAGCGG TAAGCGATTT ATCGATGTTG GCACCGGACC TGGTTTGCCT
GGGATCCCAC TTGCTATCAT GAATCCAGAT AAAGAGTTTG TACTGCTCGA TAGCTTAGGT
AAGAGAATAC GTTTTCAAAA GCAAGTGCAG TTTGAGCTTA AAATTAACAA TATCAGTTCA
GTAGAAAGCC GAGTGGAGGC TTTTCAGCCC GAGATTAAAT TTGACGGCGT ACTGAGTAGA
GCCTTTGCAT CTGTGCAAGA TATGTTAACT TGGTGTCATC ACCTTCCACA CAACGAAGGG
ATTTTCTACG CCTTAAAAGG GCAATTAAAC CAAGTTGAGC TTGAAGCTAT CCCTGAAGGA
TTTGAGCTGC TAGAAACCAT AGTACTGCAA GTGCCCCAAT TAGATGAACA GCGTCATTTG
CTGAAACTGA GAAAAAAACT CGGTTAG
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| Protein sequence | MLSSQLSAYL AEMNLSATEQ QQGQLVGFVE MLNKWNKAYN LTSVRSPEQM LIRHVMDSLT
VSPYLSGKRF IDVGTGPGLP GIPLAIMNPD KEFVLLDSLG KRIRFQKQVQ FELKINNISS
VESRVEAFQP EIKFDGVLSR AFASVQDMLT WCHHLPHNEG IFYALKGQLN QVELEAIPEG
FELLETIVLQ VPQLDEQRHL LKLRKKLG
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