| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3754 |
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| Symbol | |
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| ID | 4020316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4522649 |
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| End bp | 4524190 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957818 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_564750 |
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| Protein GI | 91795099 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.472478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAGC AGCGGATCGA GCAGTTCGAA
GTCGTTAGTG AAGCTCGCAA CGAAGGTACT ATCGTTGCAG TAAGTGACGG CATCATCCGC
ATCAACGGCC TAGCCGATGT AATGCAAGGT GAAATGATCG AACTGCCTGG TAACCGTTAT
GCCATCGCGT TGAACTTAGA ACGTGATAGC GTCGGTGCCG TAGTAATGGG CTCGTATGCC
GGTTTGGCAG AGGGCGTAAA AGTTAAGACT ACAGGTCGTA TTCTGGAAGT TCCAGTTGGC
CGTGGTCTGT TAGGTCGCGT ACTTAACACT CTAGGTGAGC CTATTGATGG AAAAGGACCT
GTCGACAACG ACGGTTATTC TCCAATCGAA GTAATTGCTC CTGGTGTTAT TGAGCGTCAA
TCAGTTGATG AACCAGTGCA AACTGGTTAT AAGACTGTTG ACTCCATGAT CCCTATCGGT
CGTGGCCAAC GTGAATTAGT GATTGGCGAT CGTCAGACTG GTAAAACAGC ACTGGCCATC
GATGCCATCA TCAACCAGAA AGAATCAGGC ATTAAGTGTG TCTATGTTGC CATTGGTCAG
AAAGCTTCTA CCATAGCAAA CGTAGTACGC AAACTAGAAG AGCACGGCGC GCTGGCTAAC
ACCATCGTTG TTGTTGCTAC TGCTTCTGAA GCAGCTGCAT TGCAGTACCT AGCACCATAT
TCTGGTTGTT CTATGGGTGA ATACTTCCGT GACCGCGGTG AAGATGCACT AATAGTTTAT
GATGATTTGT CTAAGCAAGC AGTTGCTTAC CGTCAAATTT CATTGCTACT TAAGCGTCCA
CCAGGCCGTG AAGCTTACCC AGGCGATGTT TTCTATCTAC ACTCACGTTT ACTTGAGCGT
GCTTCACGCG TAAACGCGAA CTATGTAGAA AAGTTTACCA AGGGTGCAGT AACAGGTAAA
ACCGGTTCTT TGACCGCGCT ACCTATTATT GAAACTCAAG CGGGTGACGT GTCTGCATTC
GTACCGACCA ACGTAATTTC TATTACAGAT GGTCAGATCT TCCTTGAGAC TGACTTGTTT
AACTCAGGAC TACGTCCTGC GGTTAACCCA GGTATTTCTG TTTCTCGTGT TGGTGGTGCG
GCTCAGACTA AGATCATCAA GAAACTGTCT GGCGGTATTC GTACTGCACT AGCACAGTAT
CGAGAGCTTG CTGCGTTCTC ACAGTTTGCA TCAGATCTTG ACGATGCAAC GCGTGCTCAA
TTAGAGCATG GTGAGCGTGT TACCGAACTT ATGAAACAGA AGCAATATGC TCCAATGAGC
GTAGCGGCAC AGGCTGTGGT TATTTACGCA GCTGAAAAAG GCTACCTCAA GAGTGTTGCG
CTGAATAAAG TCGGTCACTT CGAAGCCGCT CTGCTCTCGT TCATGAACAG CGAGTACGCT
GCCCTGATGA CTAACATCAA CGCTACCGGT GATTACAATG CCGATATCGA AGGTGAAATC
AAGGCTGCTC TCGACAAGTT CGTGGCGACC CAAACCTGGT AA
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| Protein sequence | MQLNSTEISD LIKQRIEQFE VVSEARNEGT IVAVSDGIIR INGLADVMQG EMIELPGNRY
AIALNLERDS VGAVVMGSYA GLAEGVKVKT TGRILEVPVG RGLLGRVLNT LGEPIDGKGP
VDNDGYSPIE VIAPGVIERQ SVDEPVQTGY KTVDSMIPIG RGQRELVIGD RQTGKTALAI
DAIINQKESG IKCVYVAIGQ KASTIANVVR KLEEHGALAN TIVVVATASE AAALQYLAPY
SGCSMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER
ASRVNANYVE KFTKGAVTGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFSQFA SDLDDATRAQ
LEHGERVTEL MKQKQYAPMS VAAQAVVIYA AEKGYLKSVA LNKVGHFEAA LLSFMNSEYA
ALMTNINATG DYNADIEGEI KAALDKFVAT QTW
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