| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3751 |
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| Symbol | atpC |
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| ID | 4020313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4519846 |
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| End bp | 4520274 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957815 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_564747 |
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| Protein GI | 91795096 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000167376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGCCA TGACAGTACA GCTTGATATT GTGAGTGCAG AAGGCGGAAT CTACAGTGGT
CGTGTGTCAC ATCTACAAGT GACCGGCTCT GAAGGTGAAC TAGGCATTAT GCATGGTCAC
GCCCCTCTGA TTAGCAAAAT TAAGCCTGGC ATGGCGCGTG TTACCAAGCA AGACGGTAGC
GAAGAAGTGT TTTATCTTTC AGGTGGTATC CTGGAAGTGC AACCTGCTTC GACCTCTATC
CTTGCAGACG TGGTATTACG TGCCGATGAC ATTGATGAGA AAGCGGCAAT TGAAGCTAAG
AATCGCGCAG AAGCCCATAT GGTTGATGCT GGTTCTGACT TCGATTACCA AGCGGCGCTG
ATTGAGATTG CTAAGGCAAC GGCTCAATTA CGTGTGCTTG AGACCATCAA GAAGAACATT
GCCAGATAA
|
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| Protein sequence | MAAMTVQLDI VSAEGGIYSG RVSHLQVTGS EGELGIMHGH APLISKIKPG MARVTKQDGS
EEVFYLSGGI LEVQPASTSI LADVVLRADD IDEKAAIEAK NRAEAHMVDA GSDFDYQAAL
IEIAKATAQL RVLETIKKNI AR
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