Gene Sden_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3729 
Symbol 
ID4020291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp4486161 
End bp4486757 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content48% 
IMG OID637957793 
Productphage tail Collar 
Protein accessionYP_564725 
Protein GI91795074 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0351559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGATC CATTTATCGG TGAGATCCGC ATGTTTGCAG GGAGTTACGC CCCTCAGTAT 
TGGGCCTTTT GTAATGGGCA ACTATTACCA ATAGCAGAAA ACCAAGCCTT ATTTTCACTA 
TTAGGTTATG TCTATGGTGG GACTCAAGGG GTTAGTTTTG CTCTTCCCGA CTTGCGTGGC 
CGGGTGCCTG TTCATGTGGG AACAGGTGCG GGGTTATCCA GTAAAGCGTT GGGGCAAAGA 
GGAGGCACGG AATATGTTTC ATTGACTAGT GCTCAGCTTC CCGCACATGC TCATATGGTA 
GATTTGAAAG CAACCGGGGA GGTCAATGTA AAGATGAGCG CCTCATCGGC TAAGGGGGAT 
ACGGCTATCC CTGGACCTAC AACTGTTCCT GCACAAGTGC TAAGCGGATT GATCCCACTT 
AATGCATACA GCACGTCACC AGATACCACG TTATTGCCTG TGAATACCAG TACGACAGTC 
AATGTTAGTG GAAATACTGC GATGATGGGG GCGGGTCGGC CTGTGGTTAT TGAGCAACCT 
TTCTTGGCGA TTAACTTTAT AATAGCGCTT CAAGGAGCAT ATCCTCCAAA GGGATAA
 
Protein sequence
MPDPFIGEIR MFAGSYAPQY WAFCNGQLLP IAENQALFSL LGYVYGGTQG VSFALPDLRG 
RVPVHVGTGA GLSSKALGQR GGTEYVSLTS AQLPAHAHMV DLKATGEVNV KMSASSAKGD 
TAIPGPTTVP AQVLSGLIPL NAYSTSPDTT LLPVNTSTTV NVSGNTAMMG AGRPVVIEQP 
FLAINFIIAL QGAYPPKG