Gene Sden_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3718 
Symbol 
ID4020280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4460872 
End bp4463562 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content51% 
IMG OID637957782 
Productmolybdopterin oxidoreductase 
Protein accessionYP_564714 
Protein GI91795063 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACCT TCGACACACC TTGGATAAAA TCCACCTGTG CCTATTGCGG CGTGGGTTGC 
GGCATTGAAG CAAAAGCCTT AGCAAATGGC CGTATCGAAG TCCGTGGCGA TGCAAGCCAT
CCGGCAAATC TAGGCAAACT TTGCTCTAAA GGGCTGGCAT TAGGAGAGAC AGTCACCAAC
GAAGGACGAT TGCTAACACC CAAAGTCAAT GGCGAGGATT GCAGTTGGGA TAGTGCATTA
ACTGAGGTTG CCAATGGCTT TTTAGAGACC ATCAAGCAGC ATGGGCCTGA TTCTGTGGCG
TTTTACTTAT CGGGGCAGCT GCTTACCGAA GACTATTACC TCGCCAATAA ACTGATGAAG
GGCTTTATCG GCAGCGCCAA TGTGGATACC AACTCAAGGC TGTGCATGTC ATCTTCGGTG
GCAGGCCATA AACGCGCCTT TGGCACCGAT ACTATGCCGG GCTGTTATCA AGATTTAGAT
CATGCCGAGC TGATTGTCTT AGTCGGCTCT AACCTAGCCT GGTGTCATCC GGTGCTGTTT
CAACGCATTA AAGCCGCAAA AGCCAAATAT CCACAGCGTA AGCTGGTGGT CATAGATCCC
AGGAGAACCG CCTCTTGCCA TGGTGCCGAC CTGCACCTCG CCATCAAGCC AGGCACAGAT
GTCATGCTAT TTAATGGTTT GCTCAATTAT CTTGCCAAGC AGCAACTCAC TGACACCGCC
TTTATTGAGG CCAATACTCA AGGTTTTGCT CAAGCACTCA CTATCGCCGC ATTGGATGCG
CCCAATATCG AGCACATAGC CCAAGTCACT GGCTGCAGCG TCGCGGACAT AAGTGCTTTT
TATCAGCTCT TTGGCAGCAC AGACAAAGTG GTGAGCCTCT ATTCCCAAGG GGTGAATCAA
TCGAGCCAAG GCACAGATAA GGTCAACAGT ATTATTAATT GCCACTTGGC GACCGGGAAG
ATTGGCCGTG AAGGGGCTTG CCCGTTTTCT ATCACAGGCC AGCCCAATGC CATGGGAGGA
CGAGAAGTGG GCGGCCTTGC CAATACCTTA GCGGCTCATC TTGAGTTTGA TTCCCCCGAG
GAGCATCAAC TCCTGAGCCA ATTTTGGCAA ACCAAAAAAC TTGCCGCAAA ACCTGGGCTA
AAGGCGGTAG AGATGTTTGA TGCGATACGC AGTGGCAAGA TAAAAGCCAT TTGGATCATG
GCCACCAACC CAGTGGTCAG CCTGCCTAAC AGCAATAAAA TTAAGGCAGC ATTGCAAAAT
TGCCCTTTAG TTGTGGTCTC CGACTGCATT GCCGACACGG ATACCGGCCG CTTAGCCCAT
GTGCAACTGC CGGCCATGGG CTGGGCTGAA AAGTCAGGTA CTGTGACTAA CTCTGAGCGA
CGTATTTCTC GCCAGCGCAG ACTCACCACT TCACCAGGCG CCGCCCGTGC CGATTGGTGG
ATAATCAGTG AAGTCGCGAA GAAGATGGGT TTTAAAGCGG CATTTAGCTA TCGCCATGAA
GGGGAGATTT TTCGTGAGCA CGCTAAACTC ACCCAGCTTG CTCATGAGCA CAAACAGCAC
GACTTAGATC TTAGTGGTCT TGCGAATATC AGTGACGCCG AGTATGCCGA GATGGCGCCG
CAGCAATGGC CTGTCACCCA ATTGCAAAAA GAGGCGAACA CAGTGCAGCA GCGCTTTTTC
GGTGACGGTA AATTTTTTAC CCCAAGCACT AAGGCGCAGT TTATTGCTGT GCACTACCTT
ACCTCCCCAC AAAGGCTGAG TTCAGCCTAC CCCTTAATAC TCAACACAGG CCGTATACGT
GACCAATGGC ATACCATGAC CCGCACTGGC TTATCACCCG GACTCAGTAG CCATCAGGGA
GAGCCTCTGC TGCTGATAAA CCCGCAGGAT GCTCAAGCAT GCTCACTAAG TAGCGAGGAC
ATAGTCCAAA TAGACAGCCC TCAAGGCCAA GCACAAATGA GGGTACAGAT TAATAATGAT
ATCAAGCTCG GCCAACTGTT TGCTCCCATA CACTGGAGCG ACAGCAACTC AAGTGCAGGG
AAAGTGACCC GCTTAACCTT AGATCTTACG GATGCGATTT CCGGTCAGCC CGAGATGAAG
CAAACCCCAG TCAGCCTTAA ACGCTGCGAC TTCAACAGCC AGGCCTTGAT TGTCAGTCGC
ACGCCCCTGA ATTTAAGTGA ATTTACTTAT TGGGTGACAC AGACGATCAC TGGCGGATTT
CACTACACTA TTGCCAGCGA CCTCAGGGCA GACGAGCTCA ATGAACGGCT ACAAAGGCTC
TGCCCGCGGC AACAAGATAT TCGCATTCAA GCCCATATCG ATGACGATAG TGTCTACCGT
TTTGCTTCCA GTAAGGCCGA GAAAATCCAA TTCGCCTATA GCGCCAGCCA GCGACTGACA
TTGAAACACT ATGACTGGTT CACCTTACTG CTAAGCCAAA CAACACCCCA GGCTAGCCTT
TTCTTAAGCC TACTATCGGC GCAGCCACAA GGTGATTTAG CCAAGGGCAA GATAGTCTGT
GCTTGTAAAC AAGTGGGTGC CACTCAACTA TGTAGCGCAA TTAAACAACA AGAGATTAAG
GATGTCGCCA CGTTAACGCA GGTCACACAG GCCGGCAGTG GCTGCGGCAG CTGCGTTGGA
GAGCTGCAGC AATTGATAAC GGAAAGCCAA GCAGAGCTAG TGACAACATA G
 
Protein sequence
MHTFDTPWIK STCAYCGVGC GIEAKALANG RIEVRGDASH PANLGKLCSK GLALGETVTN 
EGRLLTPKVN GEDCSWDSAL TEVANGFLET IKQHGPDSVA FYLSGQLLTE DYYLANKLMK
GFIGSANVDT NSRLCMSSSV AGHKRAFGTD TMPGCYQDLD HAELIVLVGS NLAWCHPVLF
QRIKAAKAKY PQRKLVVIDP RRTASCHGAD LHLAIKPGTD VMLFNGLLNY LAKQQLTDTA
FIEANTQGFA QALTIAALDA PNIEHIAQVT GCSVADISAF YQLFGSTDKV VSLYSQGVNQ
SSQGTDKVNS IINCHLATGK IGREGACPFS ITGQPNAMGG REVGGLANTL AAHLEFDSPE
EHQLLSQFWQ TKKLAAKPGL KAVEMFDAIR SGKIKAIWIM ATNPVVSLPN SNKIKAALQN
CPLVVVSDCI ADTDTGRLAH VQLPAMGWAE KSGTVTNSER RISRQRRLTT SPGAARADWW
IISEVAKKMG FKAAFSYRHE GEIFREHAKL TQLAHEHKQH DLDLSGLANI SDAEYAEMAP
QQWPVTQLQK EANTVQQRFF GDGKFFTPST KAQFIAVHYL TSPQRLSSAY PLILNTGRIR
DQWHTMTRTG LSPGLSSHQG EPLLLINPQD AQACSLSSED IVQIDSPQGQ AQMRVQINND
IKLGQLFAPI HWSDSNSSAG KVTRLTLDLT DAISGQPEMK QTPVSLKRCD FNSQALIVSR
TPLNLSEFTY WVTQTITGGF HYTIASDLRA DELNERLQRL CPRQQDIRIQ AHIDDDSVYR
FASSKAEKIQ FAYSASQRLT LKHYDWFTLL LSQTTPQASL FLSLLSAQPQ GDLAKGKIVC
ACKQVGATQL CSAIKQQEIK DVATLTQVTQ AGSGCGSCVG ELQQLITESQ AELVTT