| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3685 |
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| Symbol | |
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| ID | 4020242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4417856 |
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| End bp | 4419337 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637957744 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_564681 |
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| Protein GI | 91795030 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGA TTTTTCACTC GTTAACCACA GTCGCCCTCT TGGGCTTAAG TTCAGCATCG
GCCGTGGCAT CAAACTGGGA TGCCCATTGG TCCTTTGCCG GCCATGGTAA TGACAACTTT
AATGGTGCCC ATCATGGTGC CTTCCCGTTA AGCGGCACTG GCAGTTTCGA ATTCGGCAAG
CTTAATCAGG CCCTTTATTA TGACATTCTT AAAGTGGACT CCTTGAGCAT TCAAAAAGCG
GCTGAGCCTT TCTCTTTGTC CTTCTGGGCC TTGAGAGAAA CCCGTGATTA TGCCGAGACC
TTATTCTCTA AACAGCAGTC GCCATTCAGC GCCGGTATGT CGGTCAGCCT CGATGGTGCC
AATGCCATAG TGGTGGATAT TCGTAATGGT CAAGGCGGCA GTATCAAGAT AAAGAGTCAG
CAAGTCTGGA CCGATATGAA TGATTGGCAT CATTTAGTCG TGACCTACAA TGGCTCAATT
CAGGCAGGTG GCATTAGTTT GTACCTTGAT AATCAACGGC TCGATGTCGA TGTTATCAGT
GACAACTTAA CCGGAGACAT AGGGGCAAGT GACCCTGTCG TTATCGGTGC TGACAGCGAA
ACTAGCTACG CCACCTTCAA CGGTGCCATC GATGAAGTCT ATTTAGGCAG CCGCGCCTTT
AATAGCAGTG ATATCGAGTG TCTGTATGCA CTGAGAGACA ACTGTGTCGA TCCCATTAGT
GACGAGCCTC CAGTGATTGC CCCTCAAGGG CCACGGGGCT TTGAAGGCCC CGCTGGGCCA
CAGGGTCTAC GGGGGGCAAC AGGCTCGCAA GGTGTTAAGG GAGCGAAAGG CCCAATTGGC
GACCCAGGCG TCAAAGGCCC GCAAGGCTCG CAAGGCAGCA AAGGCGATCT GGGCTTGAAG
GGCCTAACAG GCATCGCGGG TAATCCAGGT GTTGATGGCC GTAATGGCCG TGATGGTAAA
GATGGCAACG CGGGCTTAAT GGGCTTACAA GGCCCAGATG GCCTGCAAGG CCCTAAAGGA
GTCCGGGGGG ATACTGGCCC GATGGGACCA CAGGGCGATC CTGGACCTCA AGGCTTAAAA
GGGGCGACTG GCGCCAAGGG CGTCACTGGA GCGACTGGCG ATGCTGGCCC ACAGGGCTAT
GCCGGTGCAC CTGGCATTCC TGGTGCTGAT GGTGTTCAAG GTAACCCAGG TTTACCAGGT
TTGAAAGGGA ACACTGGATC TTCTGGGCCC TCAGGCGCTC CTGGCGGCAA AGGCCCCAAA
GGGCTAAAAG GCCCTCATGG GGATGTTATT CCTGGTGATA ATGCCCCTGC ATTTGGTCCA
CAGGGGCCAA GAGGCCCAGA TGGCTACAAT ACTTATTACA GCACTGGTGG ACGTAATTTT
AGCATGGGAA CAGTACTCTC TACGGAAAAA GCCCTGAGTC CGGTTGAACG ATATAAGGCG
ATACAGGCAA GTAAAGCTAT CCAGGATGGA GACATAAAAT GA
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| Protein sequence | MKRIFHSLTT VALLGLSSAS AVASNWDAHW SFAGHGNDNF NGAHHGAFPL SGTGSFEFGK
LNQALYYDIL KVDSLSIQKA AEPFSLSFWA LRETRDYAET LFSKQQSPFS AGMSVSLDGA
NAIVVDIRNG QGGSIKIKSQ QVWTDMNDWH HLVVTYNGSI QAGGISLYLD NQRLDVDVIS
DNLTGDIGAS DPVVIGADSE TSYATFNGAI DEVYLGSRAF NSSDIECLYA LRDNCVDPIS
DEPPVIAPQG PRGFEGPAGP QGLRGATGSQ GVKGAKGPIG DPGVKGPQGS QGSKGDLGLK
GLTGIAGNPG VDGRNGRDGK DGNAGLMGLQ GPDGLQGPKG VRGDTGPMGP QGDPGPQGLK
GATGAKGVTG ATGDAGPQGY AGAPGIPGAD GVQGNPGLPG LKGNTGSSGP SGAPGGKGPK
GLKGPHGDVI PGDNAPAFGP QGPRGPDGYN TYYSTGGRNF SMGTVLSTEK ALSPVERYKA
IQASKAIQDG DIK
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