Gene Sden_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3646 
Symbol 
ID4020203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4365503 
End bp4366288 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID637957707 
Productflagellar basal-body rod FlgG 
Protein accessionYP_564644 
Protein GI91794993 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATCAG CATTATGGGT AAGTAAAACC GGCCTAGCCG CGCAAGACAC CAAAATGACC 
ACCATAGCCA ACAACTTGGC AAACGTGAAT ACCACTGGCT TTAAGCGTGA CCGGGTTGCC
TTTAATGACT TGTTCTATCA AGTCCAGCGT CAGCCTGGCG GCCAAGTCGA TGAGCTAAAC
CAGTTACCTT CAGGGTTACA GTTAGGTACG GGAACTCGAG TTGCCGGTAC GCAAAAAGTA
TTTACCACAG GTGATGTGCA CAACACTAGC CAGCAACTTG ATCTTGCCAT TGAAGGCAAT
GGTTTTTTCC AAGTGGAAGA GCCAAATGGT GATTTAGCTT ACACTCGCGA TGGTCAGTTT
TATCGCAGCA GTGAAGGCAT GATGGTGACC TCCCAAGGCT TGCCGTTAGT GCCCAATATC
GTTATTCCAG AAGACTCGAC CAATATCACC ATAGCCACAG ACGGCATAGT GATGGCAACC
ATTGCAGGCG ACGCCGAGCC ACAAGAGTTA GGTCAAATTA CCCTGATTAA CTTTACTAAC
CCTGCCGGTT TAGAAGCTCG TGGCAATAAC TTGTACCGTG AAACCGCCGC ATCAGGTGTT
GCGGTGGAAG GGGTGGCTGG CGATCAAGCG TTAGGCGGCC TGCGCCAAGG TTCATTGGAA
GGCTCAAACG TCAATGTGGT GGAAGAAATG GTGGAGATGA TTTCGACCCA GCGAGCTTAT
GAAATGAATG CTAAGGTCGT TTCAGCTTCC GATGACATGC TTAAGTTTCT TAATCAGTCA
GTATAA
 
Protein sequence
MQSALWVSKT GLAAQDTKMT TIANNLANVN TTGFKRDRVA FNDLFYQVQR QPGGQVDELN 
QLPSGLQLGT GTRVAGTQKV FTTGDVHNTS QQLDLAIEGN GFFQVEEPNG DLAYTRDGQF
YRSSEGMMVT SQGLPLVPNI VIPEDSTNIT IATDGIVMAT IAGDAEPQEL GQITLINFTN
PAGLEARGNN LYRETAASGV AVEGVAGDQA LGGLRQGSLE GSNVNVVEEM VEMISTQRAY
EMNAKVVSAS DDMLKFLNQS V