Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3631 |
Symbol | |
ID | 4020188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4351887 |
End bp | 4352879 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637957692 |
Product | OmpA/MotB |
Protein accession | YP_564629 |
Protein GI | 91794978 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.77241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCCATA AAAATGAACC TATCATCATT AAGCGTGGCA GGCGAAGCAA GCGTTCAGCG AGTCATGGTG GGGCGTGGAA AGTCGCCTTT GCCGATTTCA CCTTAGCCAT GATGGCGCTA TTTATGGTGT TGTGGATCAT GCAAATAGCC GATCAAGATG AGCGCAGCCA AATCGTGCAA TATTTGCGTG GTGAGATGTA TGCTTCGGGG GCGATGAACC CTTTCGATGT GGCGCAATCT TCATCAATTA TTGATTTTGA AGGCAGCCCG GCGATTCAGC AGGCGATAAT TACATCCGCA GGCAGTGGTC CAGAACGTGC CGGCCCTGCG ATGCATAATA ATATTCCTGC CGGAGAAGAG GAGCCTAATG CTGGGCAAGG GCCAGAATTT AATGCCATGG TGCCAGGTCA ATATGATACT CAAGCTCAGC TTGTGATGTT AGCGCGGCAA TTAAATCATG TGGTACAACA ATCGAGTATG GCTGACAATA TCGCCGTTAC CTTGGTGCCT CAAGGGATCC GTATTCTTAT TCATGACAAT ATAGACAGAT TTATGTTCAC CCGTGGCAGT GCGCAAATGC AGGTCTATTT CGAAGACTTA CTTTTGGCTT TAGGACCCGT ACTTGGGCAA GTAACCAATG CCATGGTGAT TTCTGGACAC ACGGATTCAA CGCCCTATGT GGGTACCGAG TTCACCAATT GGGAGTTATC GAGTAAGCGG GCATTGTTGG CAAGGCGAGT ATTGGAGTTT GGTGGGGTTA AGCGCAATCA AGTGATCCAA GTGACAGGCA TGGCTGATCA AGTGGCTTAT ATTCCACAAG AGCCTGCGGC TGCGGCTAAT CGCCGCATTG AAGTTTTGAT TTTAACCTCT ACCACAGAAC AGCTTATTCG TGACATGGTT GGTGTACCTG CAGAGCATTT AGATGCAGGA ATAGAGTTGC AGGATGCAAA ATTACAAGCC GAGTTAGCCT TACCTAGAGT CAGGTATCAA TAG
|
Protein sequence | MLHKNEPIII KRGRRSKRSA SHGGAWKVAF ADFTLAMMAL FMVLWIMQIA DQDERSQIVQ YLRGEMYASG AMNPFDVAQS SSIIDFEGSP AIQQAIITSA GSGPERAGPA MHNNIPAGEE EPNAGQGPEF NAMVPGQYDT QAQLVMLARQ LNHVVQQSSM ADNIAVTLVP QGIRILIHDN IDRFMFTRGS AQMQVYFEDL LLALGPVLGQ VTNAMVISGH TDSTPYVGTE FTNWELSSKR ALLARRVLEF GGVKRNQVIQ VTGMADQVAY IPQEPAAAAN RRIEVLILTS TTEQLIRDMV GVPAEHLDAG IELQDAKLQA ELALPRVRYQ
|
| |