Gene Sden_3622 details

Gene Information

• Locus tag: Sden_3622
• ID: 4020179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 4343305
• End bp: 4343925
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637957683
• Product: cytochrome c, class I
• Protein accession: YP_564620
• Protein GI: 91794969
• COG category: [C] Energy production and conversion
• COG ID: [COG2863] Cytochrome c553

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.00635609
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGT TAGCTCTTGC GCTGTCTGTA GTTGCCGCTA TGTCATCGCC TGCAAACGCC 
GAAGGTAATG CTGAAGCGGG CAAAACCAAA GCCCTTATCT GTTCAGCCTG TCACGGTGTT 
GACGGAAACA GCATGATAGA CATGTACCCT AAGATTTCAG GTCAACACGC GTCATACCTA 
GAAAAACAAA TACATGATTT TCGTTCTGCC GCAATGTCTG GTGGCAAAGA AGGTCGTATG 
GACCCTATCA TGGGCGGTAT GACTATGGCG TTAAGCGATC AAGATATTGC TGATTTGGCA 
GCATTTTTTG CGAGCAACCC CATTCAAGCG GTTGCCATTA CCGATGTGCC TGCATTAGGT 
GAAAGCCTAT ACAAAGGTGG TGATACCGAC CGTGGTATTA CCGGTTGTAT CGCTTGTCAC 
GGCCCAGATG GTAAGGGCGC TGCCGCAGCA GGTTTTCCAA CATTAGCGGG GCAGCACACC 
AATTACATCA AGATCCAACT CAATAAGTTC CGTGACGGCA GCCGTAACAA TGATTTGAAC 
GGCATGATGC AAGATATCGC TAAAAAATTA ACTGATAGCG ACATAGAAGC ATTATCTAAA 
TATATTTCAA GCATTAAGTA A 

 

Protein sequence

MKKLALALSV VAAMSSPANA EGNAEAGKTK ALICSACHGV DGNSMIDMYP KISGQHASYL 
EKQIHDFRSA AMSGGKEGRM DPIMGGMTMA LSDQDIADLA AFFASNPIQA VAITDVPALG 
ESLYKGGDTD RGITGCIACH GPDGKGAAAA GFPTLAGQHT NYIKIQLNKF RDGSRNNDLN 
GMMQDIAKKL TDSDIEALSK YISSIK