Gene Sden_3621 details

Gene Information

• Locus tag: Sden_3621
• Symbol: engB
• ID: 4020178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 4342391
• End bp: 4343050
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637957682
• Product: ribosome biogenesis GTP-binding protein YsxC
• Protein accession: YP_564619
• Protein GI: 91794968
• COG category: [R] General function prediction only
• COG ID: [COG0218] Predicted GTPase
• TIGRFAM ID: [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0138596
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCAGAAT CTATTATGGA TTTCCGCAGG GCCAAGTTTT TAATCAGTGC GCCAGATATT 
GCTCACCTTA ATCAATATTT ACCGGGTGAC GTTGGCGTAG AAATCGCCTT TGCAGGTCGC 
TCTAATGCCG GTAAGTCCAG TGCTCTCAAC GCACTGACAG AACAGAAAAG TCTTGCCAGA 
ACCAGTAAGA CACCGGGTCG TACCCAGCTA ATCAACGTGT TTGCCTTAGA TGATGATCGC 
CGTTTAGTGG ATTTGCCTGG TTATGGTTTT GCCCAAGTTC CCTTGGCTTT GAAGAATAAA 
TGGCAGCAAG CTTTAGGTGA ATACCTGCAA AAAAGAGCCT GCTTAAGCGG CGTTGTGGTA 
TTGATGGACA TTCGTCATCC ATTAAAAGAT CTCGACATGC AGATGATCGA GTGGGCAGTT 
GCCAGTGAAA TCCCGGTATT GGCGTTACTG ACTAAGTCGG ACAAGCTGGC TCAAAGTGCA 
AAAATGAAAA CAGTTAACGA AGTGCGTAGT GCGTTAGCGG ACTTTGGTGA TTGGGTGAAG 
GTTGAGCCAT TTTCATCGCT TAAGGGAACG GGCAAGCCTA AGGTGTTGAG CATTCTTAAT 
GAATGGTGCC ACCCACAATG GTTGATGGAT GCCATGGCAC AAGAATCACC AGAAGATTAA 

 

Protein sequence

MSESIMDFRR AKFLISAPDI AHLNQYLPGD VGVEIAFAGR SNAGKSSALN ALTEQKSLAR 
TSKTPGRTQL INVFALDDDR RLVDLPGYGF AQVPLALKNK WQQALGEYLQ KRACLSGVVV 
LMDIRHPLKD LDMQMIEWAV ASEIPVLALL TKSDKLAQSA KMKTVNEVRS ALADFGDWVK 
VEPFSSLKGT GKPKVLSILN EWCHPQWLMD AMAQESPED