| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3607 |
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| Symbol | |
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| ID | 4020164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4325592 |
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| End bp | 4326572 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957668 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_564605 |
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| Protein GI | 91794954 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCTGC CACCAAAACT GTTTGGCTTG TCTCCATTGA TCTTGCTGCT TTTTATCGGC
ATGAGCACAG GCTTGCAGGC GCAAACCGAT CCCAGCCAAG CCAAGGATTA TCAAGCAAAA
TGGTTAACCT CATTGCCTGT AGACAGGCTC AGCTGGGCAA GATTTTCAGC CCTTCCTATT
TCAGCCGTTG TCACCCCGGC AGTTACCACT AAATCCACCT CAGACATCAT TTTTTATCCT
CTAGAGCCAA TAGCCCCTGC GCGTCTAGAG AGTGATACCA GTACCAAGCC AAGCTTGACG
CTGGAAGCTA AGACTAAGTA CAACATCACC CTTAAACCTC AACGTCAGCA GTCGATTAAC
CCCCACAGTG CCAAGCCAAA GATTATTGCC CGTTATTCGA CTCAGGGGAC TTCCAAGCAA
TTGGCATCAG ACAAGGATAA GGTGTACCAC TATACCAAGC ATGATGGTGG CGCCGTATTT
AGTGATAGAG CCCCAGAGGG CGGGGAGTAT CAAGTTTTAT TGTTTGAATG CTTCGCTTGC
CGGCTTGATT CCAATCTAGA CTGGCATAAA ATTCCATTAT TTGCCTTAGA TTACAGCCAC
TCAGTGGCAG AAGCCGCTAA GATTTACCGC TTAGAACCCG CGCTTATTCG CGCCGTTATT
CACGCAGAAT CGGCCTTCGA TGTGCATGCG CGCTCAAAAG CTGGCGCCAT GGGATTAATG
CAACTGATGC CAACGACAGC CGCTGACATG GGGGTGACCA ATGCTTTCAA TGCCCAGCAA
AATATCTTAG GTGGCAGCCG TTATTTGGCG CAAATGCTCA AACAATTTAA CGGTGATATC
GAGCTTGCCT GCGCCGCCTA TAATGCGGGG CCCACCACAG TGACTCAATA TCGCGGTATA
CCACCTTATC CAGAAACTCA GGCCTATGTA AAACGGGTCA AAATTTTATT GCAGCGTTAC
CGCAATGTCT CAGCCAGTTA G
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| Protein sequence | MVLPPKLFGL SPLILLLFIG MSTGLQAQTD PSQAKDYQAK WLTSLPVDRL SWARFSALPI
SAVVTPAVTT KSTSDIIFYP LEPIAPARLE SDTSTKPSLT LEAKTKYNIT LKPQRQQSIN
PHSAKPKIIA RYSTQGTSKQ LASDKDKVYH YTKHDGGAVF SDRAPEGGEY QVLLFECFAC
RLDSNLDWHK IPLFALDYSH SVAEAAKIYR LEPALIRAVI HAESAFDVHA RSKAGAMGLM
QLMPTTAADM GVTNAFNAQQ NILGGSRYLA QMLKQFNGDI ELACAAYNAG PTTVTQYRGI
PPYPETQAYV KRVKILLQRY RNVSAS
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