Gene Sden_3596 details

Gene Information

• Locus tag: Sden_3596
• ID: 4020153
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 4311822
• End bp: 4312484
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637957657
• Product: type IV pilus assembly PilZ
• Protein accession: YP_564594
• Protein GI: 91794943

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACATTG CCAAGAAACC TCTTTTTTTC GACTTAACGC CAGGGAAAAT CATAGATTTA 
CAGATAGATC ATCCCGTTAG AGTGCGCATA AAAGCCGCGT TGGTAGGCTA TGAAGTGGGC 
AATTATATTA TTCTCAAACA TCCATCCCCT ATGCAGATGA GTAACTATAG TGATGTGCTG 
GTTGAAGGGA ATGTGGTGGT CGCTCGTTAT CTACTTGAAG GCCAACAAGG TGAGTGCTAT 
GCCTTTAAAG CCAGCATACG TAACGTGACT AAATTCCCAG AGAAATTTAT TTTTTTAAGC 
TACCCACAGC AAATTGAGAA TCGGCAATTA CGCACTCACC AAAGGTTTAT CACCCATCTG 
CCAGCCACGC TTTATCCAAA AGAAGAGCTC GCAGATAAGC CCACCCCTAA GTTAAAAGGC 
ATTATTTCAG ATATCTCAGC CAAGGGATGT GGTTTCGTTT TTAAAAGTAA TAACGACAAG 
ATTAAAGTGA CCCCAAAAGA AATTTTTGTC ACCATTCGCA CCGCAATAGA TGGCGATATC 
ACCATACCCG CCAGAGTCTG CAACAGCCGC TATGACGATG GCAAGGTTAA TGTCGGCATA 
CAGTTCAATG AAGACGATGA GCAAATCAAA ACCTTACTCG AGCAGCTATT TATTGAGCTG 
TAA 

 

Protein sequence

MNIAKKPLFF DLTPGKIIDL QIDHPVRVRI KAALVGYEVG NYIILKHPSP MQMSNYSDVL 
VEGNVVVARY LLEGQQGECY AFKASIRNVT KFPEKFIFLS YPQQIENRQL RTHQRFITHL 
PATLYPKEEL ADKPTPKLKG IISDISAKGC GFVFKSNNDK IKVTPKEIFV TIRTAIDGDI 
TIPARVCNSR YDDGKVNVGI QFNEDDEQIK TLLEQLFIEL