| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3595 |
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| Symbol | |
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| ID | 4020152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4309481 |
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| End bp | 4311520 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957656 |
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| Product | oligopeptidase A |
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| Protein accession | YP_564593 |
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| Protein GI | 91794942 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAACC CGCTATTGAG TGGCGCCGCC TTACCGCCTT TTTCCCAAAT TAAGCCTGAA
CATATTCAGA CCGCGGTAGA GCAAGCTATC GCCAAATGCC GCAATACCAT AGAGACCTTA
TTGGCGCAGA ATAGCCACTA CACTTGGGAT AACTTAATTG CCCCCCTTGA GCAAAGTGAT
GACGAGTTCA GCCAAATTTG GTCGCCTGTG TCCCACATGA ATTCAGTCAC CAGCTCAGAT
GCGCTGCGGG AAGCTCACGA TGCTTGCCTA CCCTTGCTGT CAGATTACGG CACCTTTGTT
GGTCAACATC AGGGCCTGTA TCAAGCCTAC AAATCTATCC ATGAGTCGGC TGAATTTACT
CACTTGCCAC AAGCTAAAAA AATGGCCATA GAACAAAGCT TGCGAGACTT TGAGTTGTCT
GGCATTGGCC TAGATGATGA GCAAAAAGTA CGTTATGGCG AAATCGTTAA ACGTCTGTCT
GAGCTCACAA GCTTGTATTC CAATCAGTTG CTCGATGCTA CCCAGGCCTG GCACAAGCTG
ATCACCGATG AATCAGAGCT GGCGGGTTTA CCGGATTCAG CTAAAGCGGC GGCCAAAGCC
ATGGCGGAAG AAGATGACAA AAGTGGTTGG TTATTCAGCT TAGATTTTCC CTCCTATTTA
CCTGTGATGA CCTACAGCGA AAACCGTGCA CTAAGAGAAG AATGTTATCG CGCCTTCGTC
ACCCGCGCCT CAGATCAAGG CCCCAATGCC GGTGAGTTCG ACAACAGTGC CGCCATGGAT
GAAATTATCG CCCTGCGCCA TGAATTAGCC CAGCTACTCG GGTTTGAATC TTACGCTCAC
AAGTCTTTAG CCACTAAGAT GGCCGAAACC CCAGAGCAAG TATTAACGTT TTTAAGCGAA
CTAGGTCAAC GCTCGAAAGA GCAAGCCAAG ACAGAGCTTG CCGAACTGCG AGCCTTCGCC
TTAAGCGAAT ACGGCGTCAG TGAAATGGAG TCCTGGGATT TAAGCTTCTA TGCTGAAAAA
TTGCAGCAAC ATAAATATGA AGTTTCTCAA GAAATATTAA GACCTTACTT CCCTGAAGAC
AAAGTGCTAT CTGGCCTTTT TTATACGGTA TCACGCCTGT TTGGGCTACG TATCGAAGAG
CAGAAAGATG TCGATACTTG GCATAAAGAA GTGCGTTTCT TCAATATTTT TGATGACACT
AATAGCCTAA GAGGCAGCTT CTACTTAGAT TTATATGCCC GCACTGGTAA GCGCGGCGGC
GCCTGGATGG ACGACTGCCG AGTGCGTCGT CAAACCCCAA ACGGCTTGCA AAAACCTGTG
GCCTATTTAA CCTGTAACTT CAATCGCCCA GTGGATGGCA AGCCTGCCTT GTTCACTCAT
GATGAAGTCA CCACGCTATT CCATGAATTT GGCCACGGCA TACACCATAT GTTGACCAAA
ATTGATGTGG CCGATGTGTC TGGCATTAAT GGGGTACCTT GGGATGCGGT GGAGCTTCCG
AGCCAATTTA TGGAAAACTG GTGCTGGCAA GAAGAGGCAC TAGGTGAAAT ATCCGGTCAC
TTTGAAACCG GCGAGCCCTT ACCTAAAGCG TTATTAGATA AAATGCTGGC GGCGAAAAAC
TTCCAATCTG GCATGATGAT GTTGCGCCAA CTTGAGTTTT CATTATTCGA TTTTAGAATG
CATCTGGAAT ACAGTGCCGA GAAAGGCGCC AACATCCAAG GCATGTTAGA TGAAGTGCGC
AGCCAGGTAG CAGTATTGAC TCCGCCAAGC TTTAACCGCT TCCAACACGG CTTTGCCCAT
ATCTTTGCTG GCGGCTACGC GGCAGGCTAT TACAGTTATA AGTGGGCAGA AGTGTTATCG
GCCGATGCCT TCTCCCGTTT CGAAGCCGAA GGTATATTTA ACCCTGAAAC CGGTAAAAGT
TTTATGAACA ACATACTCGA GATGGGCGGC AGCGAAGAGC CGATGACATT GTTCAAACGC
TTTATGGGCC GCGAACCGAA TATTGACGCC CTGTTAAGGC ATTCGGGCAT CAAGGCTTAA
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| Protein sequence | MSNPLLSGAA LPPFSQIKPE HIQTAVEQAI AKCRNTIETL LAQNSHYTWD NLIAPLEQSD
DEFSQIWSPV SHMNSVTSSD ALREAHDACL PLLSDYGTFV GQHQGLYQAY KSIHESAEFT
HLPQAKKMAI EQSLRDFELS GIGLDDEQKV RYGEIVKRLS ELTSLYSNQL LDATQAWHKL
ITDESELAGL PDSAKAAAKA MAEEDDKSGW LFSLDFPSYL PVMTYSENRA LREECYRAFV
TRASDQGPNA GEFDNSAAMD EIIALRHELA QLLGFESYAH KSLATKMAET PEQVLTFLSE
LGQRSKEQAK TELAELRAFA LSEYGVSEME SWDLSFYAEK LQQHKYEVSQ EILRPYFPED
KVLSGLFYTV SRLFGLRIEE QKDVDTWHKE VRFFNIFDDT NSLRGSFYLD LYARTGKRGG
AWMDDCRVRR QTPNGLQKPV AYLTCNFNRP VDGKPALFTH DEVTTLFHEF GHGIHHMLTK
IDVADVSGIN GVPWDAVELP SQFMENWCWQ EEALGEISGH FETGEPLPKA LLDKMLAAKN
FQSGMMMLRQ LEFSLFDFRM HLEYSAEKGA NIQGMLDEVR SQVAVLTPPS FNRFQHGFAH
IFAGGYAAGY YSYKWAEVLS ADAFSRFEAE GIFNPETGKS FMNNILEMGG SEEPMTLFKR
FMGREPNIDA LLRHSGIKA
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