Gene Sden_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3589 
Symbol 
ID4020146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4302091 
End bp4303032 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content44% 
IMG OID637957650 
Productintegrase catalytic subunit 
Protein accessionYP_564587 
Protein GI91794936 
COG category[L] Replication, recombination and repair 
COG ID[COG2826] Transposase and inactivated derivatives, IS30 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATC AGCAGTTGAC TGAGGGAAGA AGATATCAGA TTTCAGTCCT TTTAGACCAG 
GGTATTTCGA TAACTTTGAT TGCAAAAGCT ATCAATTGTC ATCGTGCGAC TGTCTATCGA
GAACTAAAAC GTTGTCATGC CCTGCAGGGT TATTGTCCTG ACAGCGCTCA AGCCAGTGCG
TGTAAGATGC GGCGTCATTC AGCCAAATAT ACGATCCCCG ATACAAGAAT AAACGTCGTC
CGCTTCCTAC TGCAACATGA TTGGAGCCCA GAGCAGATTT CACGGGTGTT ATCGGGCATG
AACCAAGCGG TTAGTCATGA ATGGATTTAC CGCTTTGTGG CAAGAAATAA ACGTCAAGGC
GGCAAGCTAT ATCGCCACCT ACGGCAGGGT CATAAGCGCT ATCGCAGAGG TAAAAAAGAG
AAAGCGCCAG CGATTAAAAA TGGTACCTCT ATCGACTCTA GACCTGCCAT CGTTGATACC
CGTGAGCGTT TTGGTGATTG GGAAATCGAT ACCGTATTAG GCAAGCATGG GACAGGTTCA
ATCGTGACAA TTTTAGAGCG AAAGACCCGT TTTTATTTAA TAAAGAAAGT GGCCTCAAAA
TCTGCTGAAG ATGTGACTAA AGCGACTATC GAATTATTGA TGCCCTATAA GCAATATGTG
CACACTATAA CTGCCGATAA TGGTCGTGAA TTCGCTCATC ATGAAGTCAT AGCCAACGCG
CTAGATACCT CGTTTTACTT TGCTCATCCG TATAGTTCTT GGGAACGTGG CGCCAATGAA
AATGCCAACG GTTTATTAAG GCAGTATGTA AAAAAAGGGA CTGACTTAAG GACAGTAAGC
GACGCCATCA TCTTATTTGC CCAGAACAGG ATTAATTACA GACCTAAGAA ATGTTTGAAG
TTTAAGCAGC CAGCTGTTGT GTTTAAACAA TTAGCCGCTT AA
 
Protein sequence
MSYQQLTEGR RYQISVLLDQ GISITLIAKA INCHRATVYR ELKRCHALQG YCPDSAQASA 
CKMRRHSAKY TIPDTRINVV RFLLQHDWSP EQISRVLSGM NQAVSHEWIY RFVARNKRQG
GKLYRHLRQG HKRYRRGKKE KAPAIKNGTS IDSRPAIVDT RERFGDWEID TVLGKHGTGS
IVTILERKTR FYLIKKVASK SAEDVTKATI ELLMPYKQYV HTITADNGRE FAHHEVIANA
LDTSFYFAHP YSSWERGANE NANGLLRQYV KKGTDLRTVS DAIILFAQNR INYRPKKCLK
FKQPAVVFKQ LAA