Gene Sden_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3578 
Symbol 
ID4020135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4292366 
End bp4293529 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content40% 
IMG OID637957639 
Producthypothetical protein 
Protein accessionYP_564576 
Protein GI91794925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGAA TTTATGAGTT TGCTGTTTTA GGTAGTATTA CTCCTGAGCA AAGACAAAGT 
TTAATAAATT CAATTCAGCA GATGGCCTCC GAGTTTGAAC TTGAACTCGA TAATCAAGTT
ATAATCTATG ATGCAGAGAC GGTAAAACAA AGAAATAGGT CTTCAGCTTT TGCTGCAGTT
TATTTTGGAG GGCTACCTCA GGTTGATATA GAAGCTGCAC ACTCAATATT CACTGAAAGT
GTTCCAATAA TTCCTGTGGT TAATAGTTTG GAGCAGTTTT CAATATGTAT TCCTAAGTTT
TTACAGCCCA CAAATGGATA TTGTCTAAAT GGACAAGATC CAGAAATAAA AGAGCTTGCA
ACATTAATGA TGGAGTGCGT AGGCTTACTG CGCCGTCAAA GGCGAATTTT TGTGAGTTAT
CGCAGGACTG AGTCACGTGA TGCTGCATTG CAGATACACG ATCTTCTTAT GAGAAAAGGA
TTTGATGTAT TCCTTGATAC TCATGATATA CGCCCTGGAG AGCCTTTTCA GGACGTTCTT
TGGCATAAGC TTTGTGACTC CGATGTGCTA ATCATGCTAG ATACACCTAC TTATTTCGAA
AGTAGATGGA CTCGTGAAGA AATCGGTCGT GCCAGGGCTA AGGAAATTCA TGTATTACGC
GTGGTTTGGC CTAACCATGA GCCAAATAAA ATGGCAGATT TGTCAGAAAC TATCTACTTA
GAAAATGAAG ACTTAGAAAA CGATAGCGGA CCACTAACTA TTGGAAAAAT AGATGAAATT
TCTCTTAAAA TAGAAAGTAT TAGAAGCCGT AGTATAGCGG CTAGATATAT GTCTATTACA
GGCCGTCTTC GGGCTGATGT TGAACGTATT GGTGCTCGCT TTGAGGGCGT TGGAGCTCAT
AGAGCAATTG CCATTCGTTT AATTGATGAT AGAAAACTCT GGCTATATCC TGTCGTAGGG
ATTCCGACCG CCGAGACTTT AAATGATATT GCAATTAAGG CTCGGTCAAA TCCTGATAAA
GGAGTCCCAG TTCTTGTATA TGACGATATA GGAATTCGAA AAACTTGGTC TGATCATTTG
CAATGGTTAG ATGAGAATAT TAAGTCTGTG CGAGGGTTGA AAATTACTCA GGCAGCTTGG
TCGCTGGCTG GTTGGGAGTA TTGA
 
Protein sequence
MMGIYEFAVL GSITPEQRQS LINSIQQMAS EFELELDNQV IIYDAETVKQ RNRSSAFAAV 
YFGGLPQVDI EAAHSIFTES VPIIPVVNSL EQFSICIPKF LQPTNGYCLN GQDPEIKELA
TLMMECVGLL RRQRRIFVSY RRTESRDAAL QIHDLLMRKG FDVFLDTHDI RPGEPFQDVL
WHKLCDSDVL IMLDTPTYFE SRWTREEIGR ARAKEIHVLR VVWPNHEPNK MADLSETIYL
ENEDLENDSG PLTIGKIDEI SLKIESIRSR SIAARYMSIT GRLRADVERI GARFEGVGAH
RAIAIRLIDD RKLWLYPVVG IPTAETLNDI AIKARSNPDK GVPVLVYDDI GIRKTWSDHL
QWLDENIKSV RGLKITQAAW SLAGWEY