| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3575 |
|---|
| Symbol | |
|---|
| ID | 4020132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 4290118 |
|---|
| End bp | 4290807 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637957636 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_564573 |
|---|
| Protein GI | 91794922 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGTA AGTGGTTTGG CTATGGACTT ATCTTGGCAC TGGTGGGCGT CATTGCCCCC
TTTGAGGTAT TCGCTCACGG GGTGGATGAC AATACACGCG CCTTTTTAGA GCAAAAGATT
GGGGTGCAAT TTTTCCCTTT TGTGTATATC GGCGCTAAAC ACATGATCAC AGGTTACGAT
CACTTGTTAT TTCTAGTGGG AGTGATCTTC TTATATCGCA GCCAAGATGT GTTCTTGTAT
GTCACCATGT TCACCTTAGG TCACAGCACC ACTTTGCTGC TAGGCGTGCT GAGCGACATT
CAAGTTAATG CTTATCTTAT TGATGCCATT ATTGGTTTAT CTGTGGTGTA TAAAGGATTC
GACAATTTAG GTGGCTTTAA ACGCTGTTTT AATTGGCAAC CCAATACCCA ATGGGCGGTG
TTGATTTTTG GTCTATTCCA CGGCTTTGGC CTCGCGACCA AATTGCAGGA ATTTGACTTA
CCTGAGGCAG GCTTACTCAC TAACTTGTTA GCCTTTAACT TGGGCGTTGA ACTCGGTCAG
TTTGCCGCTC TTGGGTTCAT TTTGATTGTC ATCACAGCTT GGCGCAAATG GCCGTCGTTC
CAACATTTTT CAACGGTAAC GAATACCTTG CTAATGAGCG CCGGGTTAAT CTTGATGGGT
TATCAACTGA CCGGCTACGC AATTAACTAA
|
|---|
| Protein sequence | MHSKWFGYGL ILALVGVIAP FEVFAHGVDD NTRAFLEQKI GVQFFPFVYI GAKHMITGYD
HLLFLVGVIF LYRSQDVFLY VTMFTLGHST TLLLGVLSDI QVNAYLIDAI IGLSVVYKGF
DNLGGFKRCF NWQPNTQWAV LIFGLFHGFG LATKLQEFDL PEAGLLTNLL AFNLGVELGQ
FAALGFILIV ITAWRKWPSF QHFSTVTNTL LMSAGLILMG YQLTGYAIN
|
|---|
| |