| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3573 |
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| Symbol | |
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| ID | 4020130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4287696 |
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| End bp | 4288187 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957634 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_564571 |
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| Protein GI | 91794920 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.075405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCCAA GACGTAAAAA GAGACTCACT CTGGCAGTGG CATTAATAGT CGGTGTAGCA
GGGGCAGCTT CATTGCTCTT GTATGCACTC AATAGCAATT TAAACTTATT CTACACCCCC
AATGAAATCA TTAATGGCAA GAACGACACT GGCATTAAAC CTGAGATTGG CCAGCGCATT
CGCATTGGCG GCATGGTCAC TATGGGATCC ATGGTAAGGG ATCCTGATAG CTTGCATGTG
GAATTCGCGG TTCATGATAG TACCGGCACC CAAGTTATCG TCACCTATGA TGACCTCTTA
CCCGATCTAT TCCGTGAAGG CCAAGGTATA GTCGCCCAAG GGGTGTTAAC TGATTCAGGT
AAGCTTGAAG CCACAGAAGT ACTGGCGAAG CATGATGAGA ACTATATGCC GCCAGAAGTG
GCTGAAGCCA TGGGAAAACA ACATAAAAAA CTTGAATACC AAGAAGGCGT AGAAAAAACC
GCTCAGTATT AG
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| Protein sequence | MNPRRKKRLT LAVALIVGVA GAASLLLYAL NSNLNLFYTP NEIINGKNDT GIKPEIGQRI
RIGGMVTMGS MVRDPDSLHV EFAVHDSTGT QVIVTYDDLL PDLFREGQGI VAQGVLTDSG
KLEATEVLAK HDENYMPPEV AEAMGKQHKK LEYQEGVEKT AQY
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