Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3572 |
Symbol | |
ID | 4020129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4287484 |
End bp | 4287693 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637957633 |
Product | Heme exporter protein D (CcmD) |
Protein accession | YP_564570 |
Protein GI | 91794919 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0932197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATTCG ACTCTATCAG TGCGTTTTTC AATATGGGCG GCTATGCCTT CTATGTTTGG CTGTCTTACG GCGTCACAGC ATTAAGCCTA GGCGGCTTGA TCATTTCAAG CTTAGGCAGA AAACGCAAAG TATTGACAGA AATAGCCAAA CAAGCTGGCC GTGAACAGAG ACTTAAACAA ATCAGAACCT CAGAAGTAAA AGGTGGCTAA
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Protein sequence | MQFDSISAFF NMGGYAFYVW LSYGVTALSL GGLIISSLGR KRKVLTEIAK QAGREQRLKQ IRTSEVKGG
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