Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3570 |
Symbol | |
ID | 4020127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4286050 |
End bp | 4286736 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637957631 |
Product | heme exporter protein CcmB |
Protein accession | YP_564568 |
Protein GI | 91794917 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0688064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAGAG GCATTAGCTA TCGACAAGCA TTCTACACTG TACTGATGCG CGACATAAAA ATCGCCATTC GTCACAGAGG GGATATTTTT AATCCGCTGT TGTTTTTCAT ACTCGTAGTT ACCTTGTTCC CATTAGGTAT AGGGCCTGAG CCCAAGGTAC TCACCCGTAT CGCCCCTGGT ATTATCTGGG TCGCGGCGTT GCTGGCTTCT ATGTTATCTC TAGAGCGATT ATTTAAAGCC GATTATAACG ACGGCGCCCT AGAGCAGATG TTACTCAGCC CGCAACCCTT AGCAGTGTTA GTACTGGCGA AGGTCTTCGC TCATTGGCTA CTCACGGGTG TGCCACTTAT CCTGATATCC CCCGTCTTAG CACTGTTACT GCAACTTGAA GCGAATTCTT ATGTGGCCCT ACTCCTGACC TTAAGCTTGG GGACTCCAGT ATTATCCTTA ATGGGCGCCA TAGGGGTTGC ATTGACTGTT GGGTTAAGAA AAGGTGGAGT GTTACTCAGT CTACTTATCT TGCCCCTTTA TATTCCAGTG CTCATTTTTG CGACCAGTGC CATGGATGCA GCAGGAATGA ATTTACCCTA TGATGGCCAA CTGGCTATAA TTGGCGCCAT GTTAGTGGCA GCGTCAGTGT TGGCTCCAAT TGCCATTGGA GCGTCCTTAA GAGTGAGTAC AAATTAG
|
Protein sequence | MNRGISYRQA FYTVLMRDIK IAIRHRGDIF NPLLFFILVV TLFPLGIGPE PKVLTRIAPG IIWVAALLAS MLSLERLFKA DYNDGALEQM LLSPQPLAVL VLAKVFAHWL LTGVPLILIS PVLALLLQLE ANSYVALLLT LSLGTPVLSL MGAIGVALTV GLRKGGVLLS LLILPLYIPV LIFATSAMDA AGMNLPYDGQ LAIIGAMLVA ASVLAPIAIG ASLRVSTN
|
| |