| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3569 |
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| Symbol | |
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| ID | 4020126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4285358 |
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| End bp | 4286041 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957630 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_564567 |
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| Protein GI | 91794916 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.191066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATATCA TCCATCAGGT TAACGAGGCT AAAGTGACAA GCAATAAACC ACTGCCAGCA
TTACTCAGTG CTAGCCTACT CACTTGTATC CGTGAAGAAC GCATACTCTT CGACCGATTA
AGCTTCGACA TTAATCCCGG TGATATCGTT CAAATAGAAG GACCTAATGG CGCAGGGAAA
ACCAGCCTCA TACGCATTTT AGCTGGGCTA TCACGGCCTT ATTCTGGCCA TGTCAGCTAT
TGCGGAGAAA CCATTTTAGC TTGCCGTGAA GAATTTAATG CTGACTTACT CTACTTAGGT
CATTTACCTG GGGTAAAGAG TGAGCTAAGC GCCGCAGAAA ATGTCGATTT CAACCTGACG
CTCAGCGGCT ATCAAGACTT TGATACCCAA GCCGCTTTAG CACATATGTC CCTAGCCGGA
TTTGAAGATG CATTAGCAGG CCACCTGTCA GCGGGGCAAC ATAGAAAAAC CGCTCTAGCC
AGACTATTGC ATACCCAATG CAAAATTTGG ATATTAGATG AGCCTTTCAC CGCCATAGAC
AAAAAAGGCG TAGAACAACT CGAGCGGTTA TTTTTGGCCC ATGTTGATAA TGGTGGTTGC
GTTATCCTGA CCACTCACCA AGACATGAGC CTGATAAAGG CCGAACAGTT ACGCACCCTC
ACCCTCGATT ACCGTTCACT ATAG
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| Protein sequence | MNIIHQVNEA KVTSNKPLPA LLSASLLTCI REERILFDRL SFDINPGDIV QIEGPNGAGK
TSLIRILAGL SRPYSGHVSY CGETILACRE EFNADLLYLG HLPGVKSELS AAENVDFNLT
LSGYQDFDTQ AALAHMSLAG FEDALAGHLS AGQHRKTALA RLLHTQCKIW ILDEPFTAID
KKGVEQLERL FLAHVDNGGC VILTTHQDMS LIKAEQLRTL TLDYRSL
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