Gene Sden_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3568 
Symbol 
ID4020125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4284769 
End bp4285062 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content48% 
IMG OID637957629 
Productcytochrome c, class I 
Protein accessionYP_564566 
Protein GI91794915 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.199847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TGTTATCAAT GGCGGCTATT GTTGCTTTGA GTTTAACGGC AAGCGTTTCA 
GCCCAAGATG GTGAAACCGT TTATAATAAA GCCTGCCAAG TATGCCATAG TATGGGTGTA
GCCGGAGCGC CTAAGGTTCA TGACGCCGCA GCTTGGGAAC CGCGTCTCGC TAAAGGGATG
GATACATTAG TTGCCTCGAT CAAGACGGGT ATGAGCGCCA TGCCACCAGG CGGCATGTGT
ACCGACTGTT CAGATGAAGA CTATAAAAAC GCTATCGAGT TCATGGCGAA GTAA
 
Protein sequence
MKKLLSMAAI VALSLTASVS AQDGETVYNK ACQVCHSMGV AGAPKVHDAA AWEPRLAKGM 
DTLVASIKTG MSAMPPGGMC TDCSDEDYKN AIEFMAK