| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3564 |
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| Symbol | |
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| ID | 4020121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4280078 |
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| End bp | 4280557 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957625 |
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| Product | cytochrome C biogenesis protein |
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| Protein accession | YP_564562 |
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| Protein GI | 91794911 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes |
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| TIGRFAM ID | [TIGR03147] cytochrome c nitrite reductase, accessory protein NrfF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000181195 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGAA CAATGCTTAT AGCCCTATGC TTATTCATCA GTGCGATAGC CAGTACTTAT
GTTCAAGCAA CGCCTGTGGA TACCTTTGCG TTTTCGTCGG CAGAGAAACA AAAGCGCGCC
TTATCACTGG CCCACGAGTT ACGCTGCCCT CAGTGTCAGA ACCAAAACCT TATCGACTCT
AACTCACCCG TGGCAAAAGA TTTACGTTTG CAGGTCTATC AAATGGTAGA AGCGGGTAAA
GGCGATGATG AGATAGTGGA GTTTATGACA TCACGCTACG GCGACTTTGT GCTTTATAAG
CCTAAGCTGG ACCCCAAAAC TTACGTGCTA TGGATAGGCC CCTTTGTATT ACTACTATTC
GGTCTCATCA TAGGTTTTGT GTTTGTTCGT AAGCAAAGGA TCGTCAATAA CAGCCAAGTA
GAACTCACAG AGGCCGATCA GCAAGAGTTA GCCGCACTTC TAAAGCAAGA TAAAGACTAA
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| Protein sequence | MIRTMLIALC LFISAIASTY VQATPVDTFA FSSAEKQKRA LSLAHELRCP QCQNQNLIDS
NSPVAKDLRL QVYQMVEAGK GDDEIVEFMT SRYGDFVLYK PKLDPKTYVL WIGPFVLLLF
GLIIGFVFVR KQRIVNNSQV ELTEADQQEL AALLKQDKD
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