| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3552 |
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| Symbol | |
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| ID | 4020106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4263253 |
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| End bp | 4264170 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637957610 |
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| Product | low molecular weight phosphotyrosine protein phosphatase |
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| Protein accession | YP_564550 |
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| Protein GI | 91794899 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase
[COG0640] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCGA GCGCGTCTAA TCCTTTAAGC TCAGTCGGCT CAAGCCAAAT CGAAGGTGAT
TCGCTCCCTA AACGGCGGGT GTTGTTTATT TGCAGCGGCA ATACTGCGCG CTCGCAAATG
GCGGAGGCGC TGCTGCGCCA TAAAGCCGAT AGCTATTTTG AGGTCTGTAG TGCTGGCACT
GATGCCGCAG AGGCCACTGA TGCAGTCGGT GTTGTGGATG AACGAGCTTT AAGTGCGCTT
ACCCAGTTGG GCATTAATAC CCAAGGCTTA GTGCCTAAGT CGATTGCACA GTTTGCCACT
CAAAGGTTTG ATTTTGTCAT CAGCCTCTGT GACAAGGCTA GTCAGGAATG CCGCAGTTAT
GCGGGTGCTG GGCAGCAATA TGCCTGGGAT ATCGCGTCCC CTAAATCTCG GGGCGGTGAA
ACCCCATTTT TAGCGACCTT AGATGACATC AGCCATAGAC TAGACTTATT TTTGCGCTTG
GAAGTGCCAC AGGCTTTGGT TCGGTCAGAT GTTCATGCCG ATGCTCATTC TCAGAGTGCG
GCAGACCCAG TCGCAGCCAG TATCATTGTC GACCCCATCA GTTTTTATAA ATGCCTAAGC
GATGATATTC GCCTAAAGAC CTTAATGCTC AGCCATTATC TGGGGGAGTT ATGCGTCTGT
GAATTGATGG TGGCATTAGA TGAGTCAAGC CAGCCGAAAG TGTCGCGCAA TTTGGCTGTG
CTGAAAAAGG CGCACATTAT CAGCGACCGA AAACACGGCC AGTGGGTGTT TTATCGCATT
AATCCCTTGT TACCTTTATG GGCCAAAGCC GTATTAGCAC AGACCACAGA GCACAATGTT
GAGGCCATAG AGCAAGAGCT GAAGCGCTTA AGCCTGATGG CGGCTCGGCC CAATAAGGCC
AGCTTTTGCA AGAGCTAA
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| Protein sequence | MSASASNPLS SVGSSQIEGD SLPKRRVLFI CSGNTARSQM AEALLRHKAD SYFEVCSAGT
DAAEATDAVG VVDERALSAL TQLGINTQGL VPKSIAQFAT QRFDFVISLC DKASQECRSY
AGAGQQYAWD IASPKSRGGE TPFLATLDDI SHRLDLFLRL EVPQALVRSD VHADAHSQSA
ADPVAASIIV DPISFYKCLS DDIRLKTLML SHYLGELCVC ELMVALDESS QPKVSRNLAV
LKKAHIISDR KHGQWVFYRI NPLLPLWAKA VLAQTTEHNV EAIEQELKRL SLMAARPNKA
SFCKS
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