| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3551 |
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| Symbol | |
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| ID | 4020105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4262144 |
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| End bp | 4263154 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637957609 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_564549 |
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| Protein GI | 91794898 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTA AAATCGGTAT TAACGGCTTT GGCCGTATGG GGCGTTTATC AATGCGGGCA
GCCTTCGATT GGGACGACAT TGAAATAGTG CAGATAAATG ACCCCGCCGG TGATGCGGCG
ACCTTAGCCC ATTTAATGAC TTTTGATTCC GTCCATGGCC GCTGGCACCA CGAAGCCACC
CATGAGGGAA GTGCCATTGT GATTAATGGT AAAGCCATTC CTTGTACACA AAACATCGCC
ACTCAAGATA CCGATTGGTC AGGTTGTGAT CTGGTGATTG AGGCATCAGG CAAGATAAAA
ACCAAGGCCT TGCTGCAAGC CTACCTAGAC CAAGGGGTAA AACGTGTGGT GGTGACCGCG
CCTGTGAAGG AAGACGGGGT ATTGAATATC GTCATGGGCG TCAATGATGG CTTATACGAC
AAGGCAATTC ACCCAATAGT GACGGCCGCC TCTTGCACCA CCAACTGCTT AGCCCCAGTG
GTTAAGGTTA TCCATGAGCA CATTGGCATC AAGCATGGAT CTATGACCAC AATCCATGAC
ATCACCAATA CCCAAACCAT TTTGGATGCG CCCCATAAAG ACCTGCGCCG TGCTCGCGCC
TGTGGCATTA GCTTAATTCC CACCACTACA GGTTCGGCGA CTGCCATTAC CCATATCTTC
CCTGAGCTTA AGGGCAAGCT TAATGGTCAT GCTATTCGTG TGCCGCTGGC CAATGCATCA
ATCACAGACT GTGTGTTTGA GCTTGAGCGC GCAACGACTG TGGAGGAAGT CAATCAGCTG
CTAAAGCAGG CCTCAGAGCA AGATCTTAAC GGCATTTTAG GGTTCGAGAC GCGGCCATTA
GTGTCCGTGG ATTACAAAAC CGATCCACGT TCGAGCATTA TCGATGCGCT TTCTACCATG
GTAGTGAACG ACACCCAAGT GAAGCTCTAT GTGTGGTACG ACAATGAGTG GGGCTATGCA
AATCGCACCG CCGAGCTTGC CCGTATGGTA GGCCGCGCCG ATAAGGAATA G
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| Protein sequence | MTIKIGINGF GRMGRLSMRA AFDWDDIEIV QINDPAGDAA TLAHLMTFDS VHGRWHHEAT
HEGSAIVING KAIPCTQNIA TQDTDWSGCD LVIEASGKIK TKALLQAYLD QGVKRVVVTA
PVKEDGVLNI VMGVNDGLYD KAIHPIVTAA SCTTNCLAPV VKVIHEHIGI KHGSMTTIHD
ITNTQTILDA PHKDLRRARA CGISLIPTTT GSATAITHIF PELKGKLNGH AIRVPLANAS
ITDCVFELER ATTVEEVNQL LKQASEQDLN GILGFETRPL VSVDYKTDPR SSIIDALSTM
VVNDTQVKLY VWYDNEWGYA NRTAELARMV GRADKE
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