| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3546 |
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| Symbol | |
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| ID | 4020100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4257296 |
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| End bp | 4259290 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637957604 |
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| Product | copper-resistance protein CopA |
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| Protein accession | YP_564544 |
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| Protein GI | 91794893 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0666183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACCA TCACCAAGGC AGAGATACCG GCCAAAGCCT TAAGGACTAA TACCTTAATG
GCTGAGACCA ATAATAGCGC TAACACTATG CCAGATAGCA CGCGGCGTCG TTTCGTGTTT
GGCGCCTCGG CCATGCTGGC CTTTGCCGCC ATTCCCTTTC CTAAGAATGC CCTCGCCAAT
GCCTTGAGCC AGTCCTTGAC TCAACTCTCG GGCAAAGTCT TCGATCTTAG CATCGACTAC
ATGACAGTGA ATTTTACCGG TAAGCCGGCA AGGGCCACAG TGGTTAACCA GCTGCTACCT
GCACCCTTGT TGCGCTGGAA GGAAGGTGAA ACTGTCACCT TGAGAGTCAA AAACAATCTG
GATCATGACA GCTCCATTCA CTGGCATGGA ATTATTCTGC CCACTGAAAT GGATGGGGTA
CCTGGCTTTA GTTTCGATGG CATCAAACCC GGTGAAACCT TTGAATATCA ATTTTTAGTG
CAGCAGAGCG GTACCTATTG GTATCACAGC CATTCGGGTT ATCAAGAGCA GACGGGCATG
TATGGCGCGA TAGTTATCGA CCCTGCAGAG CCAGATCCTG TGGAGTTTGA CCGTGAATAT
GTGGTGTTGC TGTCCGATTG GTCCGATGAA GCGCCGGAAA CCATCTATGC CAAATTAAAG
AAACAGGCGG ATTATTACAA CTTCCGTGAA AGAACCGTGA TGGATCTCTT TTCTGACATA
GGCAAAAACG GCTTAGCCAA CACCTGGAAT GCCCGTTCTA TGTGGAATAA TGCTCGCATG
AGCGAGCGGG ACATTTCCGA TGTGACCGGC TCGACTTACA CCTATTTAAT GAACGGTAAT
TCACCGGCTC AAGGCTGGCA GGCATTATTT AAACCCGGGG AAAAGGTGCG GCTGCGCTTT
ATTAACGCCG CCGCCATGAC AATATTCGAT GTTCGCATTC CTGGGCTTAA AATGACAGTG
GTGGCCAGTG ACGGGCAGAA CATTCAAGCT GTGACTGTGG ATGAGTTTCG CATCGGTGTG
GCAGAAACTT ACGATGTGCT GGTGGAGCCG GATGCGGACT CTGCCTATTG TATCTTCGCC
CAAAGCATAG ACAGGACAGG CTTTACCTTA GGTAACTTGA CTTCGAATGT GAATTTACAG
GCTGAGGTTC CTCATATGGA TCCCCCGCCC GTGCTAGGCC ACAGTGATAT GGGCATGGGT
GCTGGCGATA TGCAGGGCAT GGATCACAGC AAGATGGACA TGGGTGCTGG CGATATGCAG
GGCATGGATC ACAGCAAGAT GGACATGGGT GCTGGCGATA TGCAGGGCAT GGATCACAGC
AAGATGGACA TGGGTGCTGG TGAGATGCAG GGCATGGATC ATAGTAAAAT GGACATGGGT
GCTGGCGATT TGCAGGGCAT GGATCACAGC AAAATGGCCA TGGGGACTGC TACTGGTTTA
GGTCTGGCGG GTTTTGGCAG TAACAATGAG ATTAAGCACC TAGATAGCGA GTTTGGCCCT
GAGGTCGATA TGCGCGCCGA TACGCCGCAA TCTGGCTTGG CGGATCCTGG CATTGGCCTT
AGGGAGCACC AGCAAAGGTT TAACCGTAAG GTGCTGACCT ACGCCGATAT CAAAGGCTTG
CACCCCACCT ATGATAAGCG TGAGCCAAGC CGTGAAATTC AATTGCATTT AACCGGCAAT
ATGAACCGCT ATATGTGGTC GATGAACGGG GTTAAATTTA TGGACGCCGC ACCGCTCGAG
TTTGAATACG GTGAGCGGCT GCGAATAACC TTAGTCAACG ATACTATGAT GACCCATCCC
ATGCATTTGC ATGGCATGTG GAGTGAGCTA GAAACTGGCG ATCCTGATTT CATTCCCCGT
AAACATACAG TGCTAGTGCA GCCAGGCTCA AAAATCAGCT ACCTAGTGAC GGCCGATGCC
AGAGGCCAAT GGGCATACCA TTGTCATCTG CTATTCCACA TGCCAGGCAT GTTCAGAAAA
GTCGTGGTGA AATAA
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| Protein sequence | MKTITKAEIP AKALRTNTLM AETNNSANTM PDSTRRRFVF GASAMLAFAA IPFPKNALAN
ALSQSLTQLS GKVFDLSIDY MTVNFTGKPA RATVVNQLLP APLLRWKEGE TVTLRVKNNL
DHDSSIHWHG IILPTEMDGV PGFSFDGIKP GETFEYQFLV QQSGTYWYHS HSGYQEQTGM
YGAIVIDPAE PDPVEFDREY VVLLSDWSDE APETIYAKLK KQADYYNFRE RTVMDLFSDI
GKNGLANTWN ARSMWNNARM SERDISDVTG STYTYLMNGN SPAQGWQALF KPGEKVRLRF
INAAAMTIFD VRIPGLKMTV VASDGQNIQA VTVDEFRIGV AETYDVLVEP DADSAYCIFA
QSIDRTGFTL GNLTSNVNLQ AEVPHMDPPP VLGHSDMGMG AGDMQGMDHS KMDMGAGDMQ
GMDHSKMDMG AGDMQGMDHS KMDMGAGEMQ GMDHSKMDMG AGDLQGMDHS KMAMGTATGL
GLAGFGSNNE IKHLDSEFGP EVDMRADTPQ SGLADPGIGL REHQQRFNRK VLTYADIKGL
HPTYDKREPS REIQLHLTGN MNRYMWSMNG VKFMDAAPLE FEYGERLRIT LVNDTMMTHP
MHLHGMWSEL ETGDPDFIPR KHTVLVQPGS KISYLVTADA RGQWAYHCHL LFHMPGMFRK
VVVK
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