| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3544 |
|---|
| Symbol | |
|---|
| ID | 4020098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 4256057 |
|---|
| End bp | 4256506 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637957602 |
|---|
| Product | copper resistance protein CopC |
|---|
| Protein accession | YP_564542 |
|---|
| Protein GI | 91794891 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0711776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAT TTAACTCAGT ATTAGTCGCC GCAGGCTTAA TCTTATCCAG CTCTGCTTTT
GCCCATGTGG GTTTAAGCAG CACAACGCCC GCCAATGGCG CCATGATAAG CCAGGCGCCA
AGCACGCTTG AGCTTAATTT TTCGGCGCCG GTGCGTCTGG TAAAGCTTGC TATGCAAGAT
GAAAACCAGC TTGAGGTGCC GTTAAGTGTG CCAAAACACG CTCAAAGCCA AGCAAACTTT
GCCATAGCCT TACCTGCCTT AAAGCCTGCC AAATACACTG TGAGTTGGAT GATCATGGGC
GATGATGGTC ACAAGATGAA AGGGGAGTTT GGCTTTATGC TCCACGGCGC TAAGGCTGCT
GCTATTGATG CCGCTACTGG TACAGTGACT GATGCTGTGA AAGCCGATGC TAAGGTAGAT
ATCAAGGTAG ATCACAGTGC CCACCATTAA
|
|---|
| Protein sequence | MKLFNSVLVA AGLILSSSAF AHVGLSSTTP ANGAMISQAP STLELNFSAP VRLVKLAMQD
ENQLEVPLSV PKHAQSQANF AIALPALKPA KYTVSWMIMG DDGHKMKGEF GFMLHGAKAA
AIDAATGTVT DAVKADAKVD IKVDHSAHH
|
|---|
| |