| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3534 |
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| Symbol | |
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| ID | 4020088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4238234 |
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| End bp | 4245607 |
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| Gene Length | 7374 bp |
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| Protein Length | 2457 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637957592 |
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| Product | amino acid adenylation |
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| Protein accession | YP_564532 |
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| Protein GI | 91794881 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[V] Defense mechanisms |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins
[COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | [TIGR01720] non-ribosomal peptide synthase domain TIGR01720
[TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGT ATTTTGTTCA CAAAAAATTC GCTGAAACGG CAAGTTTATT TCCAAATGAA
ACCGCCATTG TTGAAAGTCA GCGCCAGATA AGTTATCAAC AACTCAACAC TTATGCCAAT
AACCTTGCTT ATCACATTAG TGATACTCGC CATCAAATAG GCACACCCGT TGGCTTGTTC
TTGCCCAAAA GTATTGAATA TATTTTAGGG GTATTAGCTG TTCTCAAAAG CGATCAAGCC
TTTTTACCCT TATCCCCAGA ACAGCCTGAC GCACGCCTTG GTGATATTTT ACGCAAGGCA
CAACCTAGCC TAATAATGAC CACTAAGGAG TTGGCGCTTT CGCTGAAGAA AACACTCGCC
GCACTGGATT TGCAACACAT AACCATCAAG ATATTTAACT ACGGCAATAC CGGTGAACTT
GAATTGACTC ACCTAGACTC AGGCGCATTA CTGCACAAAC CATACCCAGA TACTGAGCCA
CAAATGTCTG CGACCCCTGA GGACAGTAAC TACATTATTT TTACCTCTGG TACCACAGGA
GATCCCAAGG CAATCGTCGG TTGCCATAAA AGCCTCAGTC ACTTTATTCA TTGGGAAATG
AAAGAGTTTG CGTTATCGAG CCACCTACGG ATTGCTCAAC TAGCTCCCAT TACGTTTGAT
GTCAGCTTAC GAGATATTTT TGTGCCACTG CTCAGCGGTG GGGTTTGCTG CATTCCTGAG
CCTGAAGTGC AATTTGATGC CAGACGCCTG TTGCTGTGGA TAAGTAATAG CCATATCAAT
TTAATCCATT GCGTTCCTTC TATTTTTCGC TTGTTAATGA CAGAGCTTGA AGCTGATAAC
AATACTCAGG AATACAATAG ACAAAAATTA AGCCATTTAA AGCATATATT GCTAGCAGGA
GAGCCTCTAT TTGGTCGAGA TGCTAACCGC TGGATAACAC TGGTTGGCAA CGATATAGAA
TTGGTCAATC TTTATGGTCC TTCCGAAACG ACCTTAGCTA AATTGTTCTA TCGCCTTAAA
GGCCCAGTTG AACAAGCAAA CCAAATGATC CCCATCGGGA ACCCTATTGC TAATACAGCA
GTATTGATCC TCGCCAATAA TACCTTATGT AGAGTAGGTG ATATCGGTGA GATTTATATT
AAAACCCCTT TTCGCAGCAA AGGTTACCTT AATGATCAAC CATTGACAGA TTTAAGCTTT
ATTCAAAATC CACTCAACCC AGATAATGAA GATATTATTT ATAAAACGGG TGATTTAGGC
AGATATCTAG AAAATCACAG CGTCGAAGTC CTCGGCCGCC TTGATCGCCA GGTTAAACTC
AACGGGATAC GTGTTGAGCT TAATGACATT GAAGGTCACA TCCATAACTT ATCCGCAATC
GATCAGTGTT TTATTAATCT CTACAAAGAT GAAGATCAAT CTAGCAAACT GGTGTGCTAC
TACACTTGCC ATCAAGATAT TTCTACCAAT GAGATCAAAG ACTTACTTGC TGACAAACTC
AGTACCAATC TCATTCCCAG CATGATGATA AAATTAAGCA GCTTCCCTTT AATGCTCAAC
GGCAAAGTCG ATAAAAAAGC ACTTCCCAAT CCAGCCACGT ATTTCAATGA CTTTAACATT
GAAGAAGAAC AAGACCTAAG CCCTACCGAA TTAATACTCA GTGAGATTTG GCGCACCAGT
CTTGGGGCAG CTAGTCTCAG TAAATATCAT CATTTCTTTG ACTTAGGGGG CACCTCATTA
GCCGTCATGA AAGTACTGGG TGAAATGTAT CGTCAGCTAA ATATCGAGAT CTCCATTCAG
GATTTTTACC AGCATGACAC AATTTCAGCG CTTGCCGATC ATATTGATAA GCTTCCAGTA
TTAACCGGTG CACATTATCA AGCCATCACA TTGGCACCCA AACAACAATA TTACCCCCTG
AGCAGACAAC AGCAAAGTCT CTGGCTCAGT GAGACACTAG CGGATCAGCA AGGGCAGTTT
ACGATTCCCG GAGCCTGTCA ATTAACAGGT GATTTAAATC GCCAGGCGTT TAATCAAGCC
ATTGATGCTT TAATCAGTCG CCACGATAAT TTACGTATCG TCATTGATGA AGAAGACAAT
GGCAGCCCCA TACAACGCAT TAAGGGAGAT TTTCATTACC CACTCGACAT TATTGACTTG
TCTACTCGTC CCGACGCAGC AAAGCAGGCT AGAACAATAA TGCTCAACGA CAGTCAGCAG
GCGTTTAACT TGGCTGAAGC GCCATTATTT CGCTTAAAGC TCTTTAGGCT AGATAAGCAA
ACTCATTATT TGTATTTTTG CTTCCACCAT CTGATTTTTG ATGCTTGGTC TATGGGACTC
TTTGGCCAGG AACTCATGTC AGCCTATCAA ATACTCGCAA CTGGGGGAGA ATATAAACCC
GCACCGCTGG CGGTCCAATA CCAGGATTTT TGTCACTGGC AAACATTAGA GCAACAACAG
AAAAAGCAAA TAGCTCAAAA AAACTATTGG TTAGACCTAT TTGCACATCC CACTCCGATG
CTGGAACTGC CGACTGATTT CCCCCGTCCG CAGCAAAAAC ATTTTCGTGG CGCTCAATTA
GACTTCACTA TCGACAGCGG CATGACCAAG CAACTTAAGC AATTGAGTAT TAATCAAAAT
AGCAGTTTAT TCTCATTGTT AATGTCGATA TATCAAGTTC TATTAGCTAA ATATACCAAC
GAGCAAGATA TTGTCGTCGG CTTCCCCACT GCTGGGCGAG GTCATCCGGA TTTGAATCCG
TTAATGGGTA TGTTTGTCAA TACGCTACCT TTGAGGAGTC AATGTGAAGA CAAATTGAGC
TTTAATGAAT TTTTAAGACA AACTACAAAC AATATCAATG ATGCACTCGA CCATCAATCC
TATGGTCTAG AAGATTTAGT TAACGCCTTA GATCTTCCAA GGGATATGAG CCGTTCCCCC
TTATTCGATA CTATATTCAT GCTACAAAAT TTTGAACAAA TTGAGCAAAA AAATGCACAA
CTCATCTTGT CCGAATTGCC AGCACTACAA CATACGCCCT GGTATGATTT AACCCTTAAA
TGGATAGAAT CAGAGGGTCT TTTACACTGT AATATTATTT ATGACGAAGA CCTATTCACA
TCAGCAACTG TCTCTCGCTT AGGCCAGCAC TTTACGACGA TTGTCAGAAT GGTTTTAGCA
CAGCCTGACA TCAAACTGGC TGATATTTCA TTATTAACCG CTGCTCAGCA ACTGCAACTC
ATTGATGATT TGCGTCCAAA TGATAGCCCG ATCAATGAGC CTAATATCGT CGGTTGTTTT
GAAAATCAAG CAAAAATAGC CCCAAGCACT ATTGCACTGT CTTTTTTCGA ACAAAAAATA
AGTTATGAAA GCCTTAACCG TCAAGCTAAC CAGCTTGCTA GATATATGCA AACATTAGGC
GTCAAACCAG GTGATGTCAT TGGCTGTCAT ATGCCAAGGT CTCCCTTAAT GATCACCAGT
GCATTAGCTA TTTTAAAATT AGGGGCCATT TATTTACCAC TAGAAATAAG CTATCCCCAA
GCACGAAAGG AATACATTAT TGCTGATAGT GGTATCAGTT TTGTGTTGAG CAACACTAAC
AAGGAAGATG ACAATTTAAG TCACATTTTT AAGGATATTT GTTGGATAAA CGCCGATGCT
CCCCAGATTA TCAATTTTGA TAGTAACAAC CTCCCGCTAA TTCCCGCCAC TAATGACTTA
GCCTATATTA TTTATACTTC AGGTTCGACG GGTAAGCCTA AGGGTACGTT AGGGCATCAC
CTAGGGGTCG TGAATCTTGC ACAGCATTTT AAAGCTTATC TTAACCTCAC CGCGAATGAT
CGCTTTTTAC AGTTTGCCAA TTGTTCATTC GATGCTTCAA TTTTTGAAAT ATTTATTACG
TTATTAAGCG GCAGTACTTT GGTGCTCATC ACCGAGGAGA TAATATTAGA TACTCATGAT
TTTGAAGACT ATTTGAATCA ACAGCAAGTC ACAGTAACTG TACTCCCCCC CACTTATGTC
CGACAACTGA CCCCTGAGCA CCTGAATAGT CTGAAAACAT TATTGACTGC CGGATCGACG
ACTGATCACA CTCTGGTAGA AAAATGGTGG GATAAGGTCA GGTATATTAA TGCTTATGGT
CCGACTGAAA CCACCGTCTG TGCCAGTGTT TTTGAAGTGT CAGCCACTGC TTGGGCAGAC
TTAAAGCAAA ATAACAAACC GATCCCTATT GGTAAAGCAA TCAGTAACCT CCGCTTAGAT
GTATTGGATT CTCACCTGCA GCAATTACCT GCAGGTATTT CCGGTGAATT GTACATTTCA
GGGTTAGGTG TCTCTCATGG TTATCTCAAT CAGACGGGGT TAACCAAGCA ATGTTTTACC
CAAAACCCAC ATATGCCTGA ATTACCTATG TATAAAACCG GCGATCTTGC CCGTAGGCTC
GCCGACGGTA ACATTGAATT TCTCGGAAGG AAGGATGACC AAGTTAAAAT TCGCGGTTAC
CGAATAGAAC CCATGGAAAT TGAATATCAA TTACTACAGC TTGAACAGAT CGCAGATGCC
CGAGTTTTGG TCAATGGTAA GGCCAGCCAA CAATACCTGA GTGCTTATTA TATTGGGGTT
GCTGATGATG AAAGCATTAT CCGCCAAGCA CTATCAAGCA CACTCCCCAA GTACATGATT
CCCTCCACTT TTACGGCCTT ACGCACGTTT CCCATGACTC CCAATAATAA AGTGGACAGC
AGCGCCTTAC GTCAACTATC AGAACAACAA AAAGGAGGCA TAATTAGTCT ACCAAATAGC
AAGGACATTG AAGCTAGCAT AACGAGTATC TGGAAAAGAA TCCTTAATAT AAACCACATT
AATCAAACAC AAAGCTTCAT TGAACTTGGC GGCGATTCGA TAAAAGCGAT TCAAACTGTT
GCTGAATTAA AGAAATTGGG GTTAAAGATA AAAGCTAACC ATATCTTGCA ATATCCAACC
ATAGAGCAGC TAAGTCAACA CGTCACTTAT GCATTGCAAG AAGACAATAT CCAAGTTCAA
GGGCAAGTAC CACTAACCCC TATACAACAG TGGTTTTTTA ACCATTATCA AGGGGATAAG
AACAAATTTT TCCAACACGC ACTCTTATCC TTTACTGATA AGATTCACCA AGCAACCCTG
CAACAAGCAA TGCAAGAGGT CATGAAGCAA CATGATAGTT TACGCTCATC ATTTGTTTAT
GACATAGACT CAAAGCAATG GCGGCAAGAG GTATTAACCC CAAACATATC TATTGATTTT
CATTGCATTC ATCTGGAAAA AATTGACCAT ACATTAATGG CTATTCATAT GAACGCACTA
GCCAACCAAA ACTGGCTCAA TAAATCCACA CTGTTGCAAG GCATTATTTT CAAAGCAGAA
ACTAGCGATG ACCATGTATT TCTTCTTGCT CATCACTTGA TCGTCGATAC TGTTTCATGG
TGGATTTTAC TCGATGATAT TGAAAAATCC TACCAACAGC TACTCGCCGG AAAAAAAGTA
GACCTAGGCA GTAAAACCAG TTCATTGCAG CAATGGTCAC AACAACTTCA TAAATTTAGC
AAGAGTGAAA CATTGCAGCA AGAACGAGAA TTATGGTGCC AGACAGATCA AGCCCTGAAC
TCTGCCTTTC GCTTTGCACC AAGCAAAGAA CAGACTGATA CAGACAACAT AAGCCTTGTA
CTGAGCCAAT CACAAACCAA GGCACTATTG AGACAAAATA TCCACCAAGG CATAGCTGTA
CACGAACTAG TGTTAACCCT ACACGCTAGG GCCATGGCTA ATATATTTGG TGCAAACCAG
TATTCCGTTA TCATTGAAAA CCATGGCCGA GAGGAATGTT TTGACACTCT AGATGTCAGT
CGGACAGTGG GTTGGTTTAC CAGCATTTAT CCTTTGGTGT TGGCGCAAAA TAAGCCCTGC
CCCTTATTAC TAGATATAGC CAAAACAAAA AATATATTAC AACAAGCCCC TAATAAAGGC
TTAGGCTATG GTGTACTCAA CTATCTACCC AATAATAAGA GCATAACTGA AACGTATAGC
AACATAATGC CACAAGCCAG TTTCAATTAT TACGGTACCT TTGACCGACA AAGTCAGCGG
AGCCGAATCG TCGATGTTGC TAAATTTGAT TTACCCGCTC TACGTCCGCC ATTGCAACAT
GTTATGGACA TTTCTGGTTC AATTAGAGGA GGTCAACTTC ATATCGAACT CCATTATAAC
AACAATCGCC TAGCGACGGA TCTAGCTCAG CAGTGGCTTG CTCATATCAA CAAGGAGTTG
ATAGATTATA TTCACCTAAA ATACGATAAA AAAATGGCTA AAGTAGAGCA GGCGTTTGAA
CAAAAACTAC AAACTGGCAT AGACAAAATT CTTACACAAT ATGAAATACC TGGATTAGTA
CTCGGTGCGC GCTTTCCTAA CGGAGAAACT GTCATCTGCT GCCGGGGTAT CTCCAATACC
CAAACACAAG CTAAGTTAAC TAAAAATCAT CAATTCAGGA TCGGTAGCTT ATCAAAAACT
TTTGTCGCTA CTCTTATCCT ACAGTTGGTT GATGAGGGGA AGATCTCACT AACCCAAGCA
GTCGGAGATA TCTTAAGTCC TAGCTTGATC AACAACTCAG GCATAGATAA AAAGATCACT
GTCAGACAAT TACTTAACCA CACCTCTGGG CTAGAGGATT ATATTAATAA TGGTGAGTTT
AAAGACATTT GTCTAAATCA ACCTGAAAAA ATATGGGAAC CTGAAGAACT GCTCCGCTAT
TTTAATACTG CAGTGACCCC ACCTCTTCTT GAAACTCATT CACAATGGCG ATATTCCAGC
AGCGGTTATA TTTTACTCGG GCTTATTATC GAAAAAGTCA CCGGAGAAAA ATTTGAACAG
CGGCTTTTTA ACCGTATCAC TGCGCCACTT GGTTTACAAA ACACTCATTT TGCAGATAAT
AATGCATGTC AGAAAAGCCT AGCATCAGGG CATGACAAGC AGCTAAATCC TTTACCCAAT
AAAGACACCA GCTTCACTTG GGCGGCCGGA GGATTAATTT CTACTGTTGA AGATCTGCTC
ACCTGGCAGG CAGCCATCAA CGATGGGCGA CTCTTGAGTC AAGAGATGCA AAAGCAGCGC
TTGGATTTTA TAGACTTACC CGCGCACGTG AGTCTGGATC AACATATCCA GGCTGGTTTG
GGAATTTTCA ACATTGAGGG GCATCTAGGG CACGTAGGAG ATATGCTTGG ACACGAAGCC
GCCATATTAG CTCATGATGA TGTTCAGCTG GTTGTTTTAC TTAATGGTGA AACCAAACAC
CCAGCTATGG TATTTGGCGG ATCGATATTT GAAGCTATTT TCGAGCTGAT TTAG
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| Protein sequence | MTKYFVHKKF AETASLFPNE TAIVESQRQI SYQQLNTYAN NLAYHISDTR HQIGTPVGLF
LPKSIEYILG VLAVLKSDQA FLPLSPEQPD ARLGDILRKA QPSLIMTTKE LALSLKKTLA
ALDLQHITIK IFNYGNTGEL ELTHLDSGAL LHKPYPDTEP QMSATPEDSN YIIFTSGTTG
DPKAIVGCHK SLSHFIHWEM KEFALSSHLR IAQLAPITFD VSLRDIFVPL LSGGVCCIPE
PEVQFDARRL LLWISNSHIN LIHCVPSIFR LLMTELEADN NTQEYNRQKL SHLKHILLAG
EPLFGRDANR WITLVGNDIE LVNLYGPSET TLAKLFYRLK GPVEQANQMI PIGNPIANTA
VLILANNTLC RVGDIGEIYI KTPFRSKGYL NDQPLTDLSF IQNPLNPDNE DIIYKTGDLG
RYLENHSVEV LGRLDRQVKL NGIRVELNDI EGHIHNLSAI DQCFINLYKD EDQSSKLVCY
YTCHQDISTN EIKDLLADKL STNLIPSMMI KLSSFPLMLN GKVDKKALPN PATYFNDFNI
EEEQDLSPTE LILSEIWRTS LGAASLSKYH HFFDLGGTSL AVMKVLGEMY RQLNIEISIQ
DFYQHDTISA LADHIDKLPV LTGAHYQAIT LAPKQQYYPL SRQQQSLWLS ETLADQQGQF
TIPGACQLTG DLNRQAFNQA IDALISRHDN LRIVIDEEDN GSPIQRIKGD FHYPLDIIDL
STRPDAAKQA RTIMLNDSQQ AFNLAEAPLF RLKLFRLDKQ THYLYFCFHH LIFDAWSMGL
FGQELMSAYQ ILATGGEYKP APLAVQYQDF CHWQTLEQQQ KKQIAQKNYW LDLFAHPTPM
LELPTDFPRP QQKHFRGAQL DFTIDSGMTK QLKQLSINQN SSLFSLLMSI YQVLLAKYTN
EQDIVVGFPT AGRGHPDLNP LMGMFVNTLP LRSQCEDKLS FNEFLRQTTN NINDALDHQS
YGLEDLVNAL DLPRDMSRSP LFDTIFMLQN FEQIEQKNAQ LILSELPALQ HTPWYDLTLK
WIESEGLLHC NIIYDEDLFT SATVSRLGQH FTTIVRMVLA QPDIKLADIS LLTAAQQLQL
IDDLRPNDSP INEPNIVGCF ENQAKIAPST IALSFFEQKI SYESLNRQAN QLARYMQTLG
VKPGDVIGCH MPRSPLMITS ALAILKLGAI YLPLEISYPQ ARKEYIIADS GISFVLSNTN
KEDDNLSHIF KDICWINADA PQIINFDSNN LPLIPATNDL AYIIYTSGST GKPKGTLGHH
LGVVNLAQHF KAYLNLTAND RFLQFANCSF DASIFEIFIT LLSGSTLVLI TEEIILDTHD
FEDYLNQQQV TVTVLPPTYV RQLTPEHLNS LKTLLTAGST TDHTLVEKWW DKVRYINAYG
PTETTVCASV FEVSATAWAD LKQNNKPIPI GKAISNLRLD VLDSHLQQLP AGISGELYIS
GLGVSHGYLN QTGLTKQCFT QNPHMPELPM YKTGDLARRL ADGNIEFLGR KDDQVKIRGY
RIEPMEIEYQ LLQLEQIADA RVLVNGKASQ QYLSAYYIGV ADDESIIRQA LSSTLPKYMI
PSTFTALRTF PMTPNNKVDS SALRQLSEQQ KGGIISLPNS KDIEASITSI WKRILNINHI
NQTQSFIELG GDSIKAIQTV AELKKLGLKI KANHILQYPT IEQLSQHVTY ALQEDNIQVQ
GQVPLTPIQQ WFFNHYQGDK NKFFQHALLS FTDKIHQATL QQAMQEVMKQ HDSLRSSFVY
DIDSKQWRQE VLTPNISIDF HCIHLEKIDH TLMAIHMNAL ANQNWLNKST LLQGIIFKAE
TSDDHVFLLA HHLIVDTVSW WILLDDIEKS YQQLLAGKKV DLGSKTSSLQ QWSQQLHKFS
KSETLQQERE LWCQTDQALN SAFRFAPSKE QTDTDNISLV LSQSQTKALL RQNIHQGIAV
HELVLTLHAR AMANIFGANQ YSVIIENHGR EECFDTLDVS RTVGWFTSIY PLVLAQNKPC
PLLLDIAKTK NILQQAPNKG LGYGVLNYLP NNKSITETYS NIMPQASFNY YGTFDRQSQR
SRIVDVAKFD LPALRPPLQH VMDISGSIRG GQLHIELHYN NNRLATDLAQ QWLAHINKEL
IDYIHLKYDK KMAKVEQAFE QKLQTGIDKI LTQYEIPGLV LGARFPNGET VICCRGISNT
QTQAKLTKNH QFRIGSLSKT FVATLILQLV DEGKISLTQA VGDILSPSLI NNSGIDKKIT
VRQLLNHTSG LEDYINNGEF KDICLNQPEK IWEPEELLRY FNTAVTPPLL ETHSQWRYSS
SGYILLGLII EKVTGEKFEQ RLFNRITAPL GLQNTHFADN NACQKSLASG HDKQLNPLPN
KDTSFTWAAG GLISTVEDLL TWQAAINDGR LLSQEMQKQR LDFIDLPAHV SLDQHIQAGL
GIFNIEGHLG HVGDMLGHEA AILAHDDVQL VVLLNGETKH PAMVFGGSIF EAIFELI
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