| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3530 |
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| Symbol | |
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| ID | 4020084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4222778 |
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| End bp | 4223560 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957588 |
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| Product | bioH protein |
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| Protein accession | YP_564528 |
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| Protein GI | 91794877 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACAATG TGAATAAAGC CAAGCTACAT GTTGAGGTAC AAGGCCAAGG CGCAGATTTA
GTCGTACTCC ACGGTTGGGG GGTCAACAAC GCAGTATTTT CATCACTTAA GCATGAGTTA
GCCGATTATC GAGTCCATTA TGTGGATTTA CCTGGTTTTG GCCACAGCCC GAGCATTGAC
GGGGACATTA ACGCTTGGGT CGAGGCTTTA GTGTCCGCCC TTCCTTCAAG CGCGATTTGG
CTGGGTTGGT CATTAGGCGG TTTAGTGGCG AAACAAGCCG CCATTAGTTA TCCAGATAAG
GTGAGAGCAT TGGTCACTGT TGCCTCTTCC CCCTGTTTTA TGGCCAGAGA GATCGAAAAC
TGGCCCGGTA TTGCCCCCAA AGTACTGGCG CAATTTTCCA GTCAATTGGG CAGCAATCTG
CCAAAAACCT TAGACAGGTT CTTAGCCATT CAGGCCATGG GCAGCGATAC CATGAAGCAA
GATTTAACAG AATTAAAGCA ATTGCTACTA GATAAGCCAC TGCCGCAAGC TCAAGCACTG
GAGCAGGGGC TCGCCATGCT GGCTCAAGTG GATTTACGCC AAGAGTTAGC TAAAATCAGC
CAGCCATGGT TAAGATTTTG GGGTCGTTTG GATGGCCTAG TACCACAAAA AATCCAAGCT
CACTTGCCAC ATGGCTCACA GATAGAGGAT GTCATTCAAC ACAAGGCCTC CCACGCCCCC
TTTATCTCTC ACCAGCAAGA GTTCAGTCAG CACTTACTCA CTTGGTTAGC GAAACAACAA
TAA
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| Protein sequence | MNNVNKAKLH VEVQGQGADL VVLHGWGVNN AVFSSLKHEL ADYRVHYVDL PGFGHSPSID
GDINAWVEAL VSALPSSAIW LGWSLGGLVA KQAAISYPDK VRALVTVASS PCFMAREIEN
WPGIAPKVLA QFSSQLGSNL PKTLDRFLAI QAMGSDTMKQ DLTELKQLLL DKPLPQAQAL
EQGLAMLAQV DLRQELAKIS QPWLRFWGRL DGLVPQKIQA HLPHGSQIED VIQHKASHAP
FISHQQEFSQ HLLTWLAKQQ
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