| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3529 |
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| Symbol | |
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| ID | 4020083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4221853 |
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| End bp | 4222734 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957587 |
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| Product | competence protein ComF |
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| Protein accession | YP_564527 |
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| Protein GI | 91794876 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGCAT GGATAACCAA GCTGCTAGCG TCAATCTCTA CAATCCCTAA GCAAGTGCAG
GCTAGTTTAC CTAACCGCTG TTTGTTGTGC CATCAAAGCA TAGATAATAC CGGACAAGCG
CCCCGGCAGC TGCGGTTCTC GGGTTTGTGC AAAGTGTGTC TTGAAGCATG TCTATATCAT
GAACCCCATT GCCTAGGTTG CGGCAAAACC TTAGTGGAAC CCAGTCATTT AACCACTGCG
TCTTTAGCCC CTTCCTCTTT AGCCACTTCC CCTTTAGCCA CTTCCTCTTT AGCTCCAGGG
CAGTTAACAG CAGGTGCACA ATCAAACATC TATTGCGGCC AATGCCTAAA GACAGTGCCG
CTTAAAGTGA TTGCCCCTGC CAGTTACCAT CATGGTCTTG GCCCTGTGGT GGCTGCAATA
AAATATCAGC AGCAATTGGC ACCCTTGAAG GTGCTGGTCG GGGCGCTGGT GAGCCGAGTG
AATCAATTAG TTGAGCAGAA ATTAATAATA TTGCCGCAAG TCTTGTTGCC TGTGCCCTTA
CATCCTCAGC GATTAAAGCA GCGGGGTTTT AATCAAGCTT GGTTGATTGC CAAAGAGATA
AGCGTGCAGC TTAATATTCC CCTCGATGCC AATGTGCTTA AGCGAGTGGC AGACACTCAA
CCTCAGGCAG GGATGACAGG CAAGCAAAGG CGAAAAAATT GCCATAAAGC CTTTGAATTA
GTTAATCATA TACCTTATCA GCGCGTCGCC TTGGTGGATG ATGTGCTAAC CACAGGCACA
ACGGCCAATG AAATCGCCAA ATTGCTTAAT AAACAAGGCG TTTATGTGGA TGTTTGGTGC
CTAGCCAGAG CGGAAGCCCC CAGCCTTAGA GGACAGGATT AA
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| Protein sequence | MRAWITKLLA SISTIPKQVQ ASLPNRCLLC HQSIDNTGQA PRQLRFSGLC KVCLEACLYH
EPHCLGCGKT LVEPSHLTTA SLAPSSLATS PLATSSLAPG QLTAGAQSNI YCGQCLKTVP
LKVIAPASYH HGLGPVVAAI KYQQQLAPLK VLVGALVSRV NQLVEQKLII LPQVLLPVPL
HPQRLKQRGF NQAWLIAKEI SVQLNIPLDA NVLKRVADTQ PQAGMTGKQR RKNCHKAFEL
VNHIPYQRVA LVDDVLTTGT TANEIAKLLN KQGVYVDVWC LARAEAPSLR GQD
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