| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3517 |
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| Symbol | |
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| ID | 4020071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4208164 |
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| End bp | 4209699 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957575 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_564515 |
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| Protein GI | 91794864 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCAAT GGTTGTATAG TTTAATCGTG GTGCTGCTAG CACCCCCCTT AGCGGCATCT
GAAATGCCGT TGAACATGAC TCAAGGTGTG ACTGAGATCA GTGGCAAAGT CTACGATCTG
CACATGATCA TCTTGTATAT TTGCTGCGTC ATTGGCCTGG TGGTCTTTGG TATCATGATT
TATTCCATGA TTTACCATAG AAAATCCAAA GGTGCGGTGG CAGCCCACTT CCACGAAAGC
ACTAAAGTCG AAATCGCTTG GACCGTGGTT CCCTTTATCA TTTTGATCGC GATGGCAATT
CCTGCCACTA CGACCTTGAT TGCCATGGAA GATGCCAGCG ATGCCGATCT CACCATCAAG
ATCACGGGTT CCCAATGGAA ATGGCATTAC AGCTACTTCG ATAAAGATAT CGAATTTTAT
AGCGTTTTGG CTACGCCAAA GGGCCAAATT GACGGCACTG AAGCCAAGGG CGAGCACTAC
CTGTTAGAGG TGGATAAGCC CTTAGTCCTG CCCATCAATC GCAAAGTGCG TTTCTTAATG
ACGTCCGATG ATGTTATCCA TTCTTGGTGG GTGCCCGCTT TTGCAGTTAA GAAAGATGCC
AATCCAGGTT TCATCAACGA GGCTTGGACC AGAATTGATA AAACTGGCAC CTTCCGTGGT
CAATGCGCCG AGCTTTGCGG TAAAGATCAT GGCTTTATGC CCATAGTGGT TGAAGCCGTA
ACCGAGGCCG AGTTTGATAC TTGGCTTGGG GATCAAAAAC GCTTAGCCGA CGAAGCCGCC
GCTATTGCCA AAGCCGCCCT TAGCGAAACC TTGCCGATTG AGGAATTAAT GGCACGAGGC
GAGCAAGTCT ATATGGCTAA CTGCGCCGCT TGCCACCAAC CCAATGGCGC TGGTCTGCCT
GGAGCCTTCC CTTCCCTCAT CAAGAGTCCG CTTATTAATG GACCTGTGAT GGATCACATC
AATATTGTTG TCAATGGCAA AGCGGGCACC GCCATGCAAG CCTTTGGTAA GCAATTAACG
GCTAAAGACG TTGCCGCCGT AGTGACCTAT GAGCGTAATG CTTGGGGTAA TGACTCAGGA
GATGCGGTAC AAGCTGCTGA TGTGAATGCC TTAAATTCAG CGGCCAGCGC GCCAACTGAA
GCCATTGAGA CTCAAGTAGA AGTGCCTGCG GACGTTGTGA CTGCTGTTGA GGCGGAAGTT
GAAGCAGCGC CAGACTTAAG CCCTAAAAGC CTGGAAGAGC ACATGGCACA AGGTGAGCAA
GTCTATATGA CCTATTGCGC CGCCTGCCAT CAACCTACGG GTGCTGGCAT ACCAGGGGCA
TTCCCATCAC TTATCGGCAG TCCCATTATC AAAGGGGATG TTTCTGCCCA CATAGACATA
GTGAAAAATG GCAAGCCTGG TACGGCAATG CAGGGCTTTG GCAAGCAACT GAGCCCACAG
CAACTGGCCG CCATTGTGAC CTATGAGCGT AACGCTTGGG GTAATAACAG TGGTGATGTC
GTACAGGCAA CTGATGTTGT CAGTCAAGGA CAGTAG
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| Protein sequence | MKQWLYSLIV VLLAPPLAAS EMPLNMTQGV TEISGKVYDL HMIILYICCV IGLVVFGIMI
YSMIYHRKSK GAVAAHFHES TKVEIAWTVV PFIILIAMAI PATTTLIAME DASDADLTIK
ITGSQWKWHY SYFDKDIEFY SVLATPKGQI DGTEAKGEHY LLEVDKPLVL PINRKVRFLM
TSDDVIHSWW VPAFAVKKDA NPGFINEAWT RIDKTGTFRG QCAELCGKDH GFMPIVVEAV
TEAEFDTWLG DQKRLADEAA AIAKAALSET LPIEELMARG EQVYMANCAA CHQPNGAGLP
GAFPSLIKSP LINGPVMDHI NIVVNGKAGT AMQAFGKQLT AKDVAAVVTY ERNAWGNDSG
DAVQAADVNA LNSAASAPTE AIETQVEVPA DVVTAVEAEV EAAPDLSPKS LEEHMAQGEQ
VYMTYCAACH QPTGAGIPGA FPSLIGSPII KGDVSAHIDI VKNGKPGTAM QGFGKQLSPQ
QLAAIVTYER NAWGNNSGDV VQATDVVSQG Q
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