| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3513 |
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| Symbol | |
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| ID | 4020067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4202672 |
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| End bp | 4203925 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957571 |
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| Product | aromatic amino acid transport protein |
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| Protein accession | YP_564511 |
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| Protein GI | 91794860 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAATC ACATGAATGC GGCCAAGCAT GGTCAGGGCA AGTCTCTATT TGGCGGGGCC
ATGATTATCG CAGGCACCAC AGTGGGGGCG GGAATGTTTT CTTTGCCCGT GGTGGGCGCA
GGCATGTGGT TTGGTTATTC AATGCTTATG CTAGTGGCGG TATGGTTCTG CATGCTGATG
TCAGGCTTGT TGCTGTTAGA GGCCAACCTG CACTTTGAGC CTGGGGCCAG CTTCGATACC
CTGACTCGCC ATACCTTAGG GCGTTTCTGG CGCATAGTGA ATGGCCTGTC TATCGCTTTC
GTGTTGTATA TCTTAACTTA TGCCTATATC AGCGGTGGTG GCTCTATCGT TAACCACAGC
TTAGGGACCT TGGGCTTAAG TTTGCCGCAA AGTGTGGCGG GGTTAGTGTT CGCCTTAGTA
CTGGCCTTGG TGGTGCTGAT AAGTACTCAG GCCGTGGATA GAATTACCAG CATAATGCTG
GGGGGAATGG TGTTAAGTTT CTTCCTCGCC ATAGGTAATT TACTGCTTGA AATTGATATG
CAAAAGCTTA TTGAGCCAGA CGGTGAGGCT AGCTATCTGC CGTATTTATT TGCGGCAATT
CCCTTTGGGC TCGCCAGTTT TGGCTACCAC GGTAATGTGC CAAGCTTAGT CAAATATTAC
GGCAAAGACC CAGGCACAAT CGTTAAGGCC ATCTGCCTGG GTACTTGCAT CGCCTTGGTT
ATTTATAGCT GCTGGTTAGT GGCGACCATG GGCAATATTC CCCGCAGTAT CTTCGCCGAT
ATTATTGCTA AAGGCGGTAA TATGGGGGTG CTAGTGGCCG CCTTATCTGA GGTGATTTCT
AGTGCTTGGC TCAACAATAT GCTGACCTTG TTTGCCAACC TTGCGGTGGC CTCATCCTTT
CTTGGGGTGA CCTTAGGCTT ATTCGATTAT CTCGCCGACT TGTTCGATTT TGACGATAGC
CGTAAGGGAC GGTTAAAGAC TGCTGCCGTG ACCTTTATTC CTCCTACGGT TTTAGGCTTG
CTATTCCCCA ATGGCTTCTT GATGGCCATA GGTTTTGCCG CCTTGGCAGC GACCATTTGG
GCGGTAATAG TGCCAGCATT ACTCGCCTAC AAGGTGAGGA AGTTATCCCC AGACTATGAC
GGTTTTAAAG TGCCAGGTGG CACACCACTT ATTATCCTAG TGGTGTTATT TGGTTTCATC
ACCGCGAGCT GTCATTTACT TGCCATGGCC GATATTTTGC CGGTTTATGG CTAA
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| Protein sequence | MANHMNAAKH GQGKSLFGGA MIIAGTTVGA GMFSLPVVGA GMWFGYSMLM LVAVWFCMLM
SGLLLLEANL HFEPGASFDT LTRHTLGRFW RIVNGLSIAF VLYILTYAYI SGGGSIVNHS
LGTLGLSLPQ SVAGLVFALV LALVVLISTQ AVDRITSIML GGMVLSFFLA IGNLLLEIDM
QKLIEPDGEA SYLPYLFAAI PFGLASFGYH GNVPSLVKYY GKDPGTIVKA ICLGTCIALV
IYSCWLVATM GNIPRSIFAD IIAKGGNMGV LVAALSEVIS SAWLNNMLTL FANLAVASSF
LGVTLGLFDY LADLFDFDDS RKGRLKTAAV TFIPPTVLGL LFPNGFLMAI GFAALAATIW
AVIVPALLAY KVRKLSPDYD GFKVPGGTPL IILVVLFGFI TASCHLLAMA DILPVYG
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