| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3505 |
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| Symbol | |
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| ID | 4020059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4192852 |
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| End bp | 4194315 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637957563 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_564503 |
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| Protein GI | 91794852 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000471575 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA AAGGCTTTTT TTCCTGGTTT CGTAAAGACA AAACCGCAGA TGAAATCGAT
GCAACACAAA ATGACTCAGC GAATGAAAAG TCGTTAGCAG AACAACAAGC GGCGCAAGCC
GAAAATGCCC ACCTTGAGGC AGAGCAGGCG GCGCAAGCGG AAGCGGCTCG ACTAAAGTTA
GAGCAGACAG AGCAGGCGGC CCAAGCAGAA GCGGCTCGAC TAAAGTTAGA GCAGGCAGAA
CAGGCGGCGC AAGCAGAAGC GGCTCGGCTA AAGTTAGAAC AGGCTGAACA GGCGGCACAA
GCCGAAGCGG CTCGTCTAGA GTCAGAACAG GCTGAACAAG CTATTCAAGA AAAAGCCGCC
CTAGACCAAA TTGCCAAAGA GCAAGCACAA GCGTTAGCCG CAGCCGAGCT AGCCGCCAAA
GAGCAAGCGC AAACTGTCGC CGAAGTGCCA GAGAACATTC AAGACGAACC ACAGCAAAAG
CCAGTCAAAG AAGGCTTATT TGCCCGTTTA AAACGTGGCT TGATGCGCAC CAGTGAAAAT
ATCGGCAGTG GTTTTATTGG CTTATTCAAA GGCAAAAAAA TCGATGATGA TTTATTCGAA
GAATTAGAAG AGCAATTATT GATTGCCGAT GTGGGGGTTG AAACCACCAC TAAGCTGATT
GCTAAATTAA CCGAGCATGC TTCACGCAGG CAGCTTAAAG ATGCCGAGGC GCTGTATGAT
CTGATGCGTG ATGAAATGCA AAAGATGCTA GAGCCAGTGG CCATCCCTTT AGTGCCAGAT
AATAGCGAGG GGCCTTTTGT TATTTTAATG GTGGGCGTTA ACGGCGTGGG TAAAACAACC
ACCATAGGTA AGCTCGCCAA GCAGTATCAG AGCCAAGGCA AATCTGTGAT GTTAGCCGCA
GGTGACACGT TCCGCGCCGC TGCCGTTGAG CAATTACAAG TTTGGGGACA ACGTAACAAT
ATTCCCGTGG TGGCTCAGCA TACTGGTGCC GATAGCGCTT CTGTCTTGTT TGATGCCTTC
CAAGCGGCAA AATCCCGTAA AGTGGATGTC TTGATTGCCG ATACCGCAGG GCGCCTGCAA
AACAAGAGCC ACCTGATGGA AGAACTTAAG AAAGTGGTTC GCGTCATGAA AAAGCTCGAC
GCTAATGCCC CCCATGAGGT GATGCTAACC TTAGATGCGA GCACAGGGCA AAATGCCATT
AGCCAAGCTC AGCTGTTCCA AGAAGCTGTG GGTGTGACTG GCATTACCTT AACTAAGCTC
GATGGCACAG CTAAAGGCGG GGTGATTTTC GCTATCGCCG ATAAGTTCTC TATTCCTATT
CGCCACATTG GTGTCGGCGA GCAAATCGAT GACTTACGTA CTTTTAATGC CGCCGATTTT
ATCGATGCGC TCTTTACGCA AGAAAGGGTT CCTCAAGAAA AGGTTACTCA AGAAAGTGCG
AGTCAAGCCA AGGCAGGACA ATAA
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| Protein sequence | MAKKGFFSWF RKDKTADEID ATQNDSANEK SLAEQQAAQA ENAHLEAEQA AQAEAARLKL
EQTEQAAQAE AARLKLEQAE QAAQAEAARL KLEQAEQAAQ AEAARLESEQ AEQAIQEKAA
LDQIAKEQAQ ALAAAELAAK EQAQTVAEVP ENIQDEPQQK PVKEGLFARL KRGLMRTSEN
IGSGFIGLFK GKKIDDDLFE ELEEQLLIAD VGVETTTKLI AKLTEHASRR QLKDAEALYD
LMRDEMQKML EPVAIPLVPD NSEGPFVILM VGVNGVGKTT TIGKLAKQYQ SQGKSVMLAA
GDTFRAAAVE QLQVWGQRNN IPVVAQHTGA DSASVLFDAF QAAKSRKVDV LIADTAGRLQ
NKSHLMEELK KVVRVMKKLD ANAPHEVMLT LDASTGQNAI SQAQLFQEAV GVTGITLTKL
DGTAKGGVIF AIADKFSIPI RHIGVGEQID DLRTFNAADF IDALFTQERV PQEKVTQESA
SQAKAGQ
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