Gene Sden_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3494 
Symbol 
ID4020048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4182504 
End bp4183712 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content50% 
IMG OID637957552 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_564492 
Protein GI91794841 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.61895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGTA ATCTGTTAGC CCTATTGATG TCTATGGTGG TGTTAAGCCC CTTGGCTATC 
GACATCTATT TACCTGCAAT GCCCACCATG GCAGTGGATT ACGCTGTGTC GAACAGCGAG
ATCCAATCGA CCTTGGTGCT ATTCTTATTT GCTATGGGCG TCGGTCAGAT TTTAATTGGC
CCTTTAGCCG ACAGATTCGG CCGTCGTCCA ATCGCGCTAT TTGGCATAGT GCTTTATGGT
GCCAGCAGCT TATTGGCCGC GGCGTCGGTG GATTTTTATT GGCTGCAAAT CGCGAGAGTG
CTACAAGGTC TAGCGGCATG TTCGACCTCA ATAGTGGTCT TCAGCGCAGT GCGAGACTGC
TATAGCGCCA AAGAAAGCAT GACTATGTAC AGCTATTTAA ATGGTGCCAT TTGCGTTATT
CCGGCCTTAG CACCCACCTT TGGCGGTCTA TTGGCGCTGG AATTTGGCTG GCGTTCAACC
TTTATGTTTA TGGCGCTGTA TGCGGTGTTT GTACTCTTGT TTGTCGGCTA TCGTTTCCCC
GAGACGCGGC CGTTAAATAC CGACAGCAAA GGCCCGATTT ATCGTTGGGC TCGCTACAAG
CCTGTGGTCG CCAATGTGCA CTTTATGTTT TATGCCTTAG TCTGCATGGC CGCCATGGCT
TCAATATTGG CCTATGTGTC TTACTCACCT GTGTGGTTGA TCGGTGGTTT AGGTATGTCA
GAGTTGATGT TCAGTGGTTT ATTTGGTTTA AATGCTTTTG TGAACGTCAC CGCCTGTTTT
GCCGCTCCCT TGTTGGTGAG TAAGTTAGGC AACCGTAATA GCGTTATCCT CGCCCTGTCG
CTCATGCTCA GTGCTGCTGT GATTGAAGCG GGATTGCAGC TGATGTTCAC TCTGGACGGT
TTACTGGGCG GGTTAGCATT TATGCTTCCT ATGATGCTGT TATGTATAGG TTTTGCGCTT
CTTCTTGGCC CCGCGACCAC CATGGCGCTA GCAGGCTTTG GTGAACGAGC AGGAACGGCC
ACGGCCATGT TAGGTTTTAT CCAGATGAGC GGCGCGGCCT TATTAACCGG TCTTATCCAA
TTAACGTCAA TACCAGCACC TTATGCGGTC GCCTTAATCA TGGGTGGCTT AAGCACAATA
CTGCTGCTGA TGATGGCGAC TAAAGGCTTG GGACATTGGC ATCAAGAGCG TTTACAGCTG
GAGCATTAA
 
Protein sequence
MRRNLLALLM SMVVLSPLAI DIYLPAMPTM AVDYAVSNSE IQSTLVLFLF AMGVGQILIG 
PLADRFGRRP IALFGIVLYG ASSLLAAASV DFYWLQIARV LQGLAACSTS IVVFSAVRDC
YSAKESMTMY SYLNGAICVI PALAPTFGGL LALEFGWRST FMFMALYAVF VLLFVGYRFP
ETRPLNTDSK GPIYRWARYK PVVANVHFMF YALVCMAAMA SILAYVSYSP VWLIGGLGMS
ELMFSGLFGL NAFVNVTACF AAPLLVSKLG NRNSVILALS LMLSAAVIEA GLQLMFTLDG
LLGGLAFMLP MMLLCIGFAL LLGPATTMAL AGFGERAGTA TAMLGFIQMS GAALLTGLIQ
LTSIPAPYAV ALIMGGLSTI LLLMMATKGL GHWHQERLQL EH