Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3494 |
Symbol | |
ID | 4020048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 4182504 |
End bp | 4183712 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637957552 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_564492 |
Protein GI | 91794841 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.61895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGTA ATCTGTTAGC CCTATTGATG TCTATGGTGG TGTTAAGCCC CTTGGCTATC GACATCTATT TACCTGCAAT GCCCACCATG GCAGTGGATT ACGCTGTGTC GAACAGCGAG ATCCAATCGA CCTTGGTGCT ATTCTTATTT GCTATGGGCG TCGGTCAGAT TTTAATTGGC CCTTTAGCCG ACAGATTCGG CCGTCGTCCA ATCGCGCTAT TTGGCATAGT GCTTTATGGT GCCAGCAGCT TATTGGCCGC GGCGTCGGTG GATTTTTATT GGCTGCAAAT CGCGAGAGTG CTACAAGGTC TAGCGGCATG TTCGACCTCA ATAGTGGTCT TCAGCGCAGT GCGAGACTGC TATAGCGCCA AAGAAAGCAT GACTATGTAC AGCTATTTAA ATGGTGCCAT TTGCGTTATT CCGGCCTTAG CACCCACCTT TGGCGGTCTA TTGGCGCTGG AATTTGGCTG GCGTTCAACC TTTATGTTTA TGGCGCTGTA TGCGGTGTTT GTACTCTTGT TTGTCGGCTA TCGTTTCCCC GAGACGCGGC CGTTAAATAC CGACAGCAAA GGCCCGATTT ATCGTTGGGC TCGCTACAAG CCTGTGGTCG CCAATGTGCA CTTTATGTTT TATGCCTTAG TCTGCATGGC CGCCATGGCT TCAATATTGG CCTATGTGTC TTACTCACCT GTGTGGTTGA TCGGTGGTTT AGGTATGTCA GAGTTGATGT TCAGTGGTTT ATTTGGTTTA AATGCTTTTG TGAACGTCAC CGCCTGTTTT GCCGCTCCCT TGTTGGTGAG TAAGTTAGGC AACCGTAATA GCGTTATCCT CGCCCTGTCG CTCATGCTCA GTGCTGCTGT GATTGAAGCG GGATTGCAGC TGATGTTCAC TCTGGACGGT TTACTGGGCG GGTTAGCATT TATGCTTCCT ATGATGCTGT TATGTATAGG TTTTGCGCTT CTTCTTGGCC CCGCGACCAC CATGGCGCTA GCAGGCTTTG GTGAACGAGC AGGAACGGCC ACGGCCATGT TAGGTTTTAT CCAGATGAGC GGCGCGGCCT TATTAACCGG TCTTATCCAA TTAACGTCAA TACCAGCACC TTATGCGGTC GCCTTAATCA TGGGTGGCTT AAGCACAATA CTGCTGCTGA TGATGGCGAC TAAAGGCTTG GGACATTGGC ATCAAGAGCG TTTACAGCTG GAGCATTAA
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Protein sequence | MRRNLLALLM SMVVLSPLAI DIYLPAMPTM AVDYAVSNSE IQSTLVLFLF AMGVGQILIG PLADRFGRRP IALFGIVLYG ASSLLAAASV DFYWLQIARV LQGLAACSTS IVVFSAVRDC YSAKESMTMY SYLNGAICVI PALAPTFGGL LALEFGWRST FMFMALYAVF VLLFVGYRFP ETRPLNTDSK GPIYRWARYK PVVANVHFMF YALVCMAAMA SILAYVSYSP VWLIGGLGMS ELMFSGLFGL NAFVNVTACF AAPLLVSKLG NRNSVILALS LMLSAAVIEA GLQLMFTLDG LLGGLAFMLP MMLLCIGFAL LLGPATTMAL AGFGERAGTA TAMLGFIQMS GAALLTGLIQ LTSIPAPYAV ALIMGGLSTI LLLMMATKGL GHWHQERLQL EH
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