| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3490 |
|---|
| Symbol | |
|---|
| ID | 4020044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 4179902 |
|---|
| End bp | 4180213 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637957548 |
|---|
| Product | putative glycine betaine/choline/proline transport system permease protein |
|---|
| Protein accession | YP_564488 |
|---|
| Protein GI | 91794837 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGAA AAAGCGCAGT CCATATCAGC CCTCTTCAAA AATTAGAATA TGCCAAGCTG
ATGGTCGAAC AGGGTTACAC CAACAAGCAA ATTGAAGATA TGTCAGGTGC CGGTAAATCT
GCGGTGTCTA GATGGAAAGT GCAGTATCAA GCTGAATTAG CCGGTGAAAC CCCAGAAAAT
GCCAAAGCAT TAACTGAAGA CCAACGAAGA ATACAGCTTC TAGAAGCCCA ACTAAAACAA
GCCATGAGGG ATAATGATAT CTTAAAAAAG GCTGCAGCTT TCTTCATTCG AGACAATCAA
AACTTAAAAT GA
|
|---|
| Protein sequence | MTRKSAVHIS PLQKLEYAKL MVEQGYTNKQ IEDMSGAGKS AVSRWKVQYQ AELAGETPEN
AKALTEDQRR IQLLEAQLKQ AMRDNDILKK AAAFFIRDNQ NLK
|
|---|
| |