| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3486 |
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| Symbol | |
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| ID | 4020040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4172695 |
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| End bp | 4174020 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637957544 |
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| Product | peptidase M16-like protein |
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| Protein accession | YP_564484 |
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| Protein GI | 91794833 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0315623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACGCA GTTTTACTGC CCTGACGTTA TTAATGGGGC TAGTTGCCTC ATCGGTAGCA
CAGGCGACTA CCGCCGAAGA TATCAAGAGT TTTACCTTAG ATAACGGCAT GAAAATTATG
GTATTAGAGG ATGCATCCAT TCCTAATGCC AACATGTATT TATTTTGGAA AGTCGGTTCT
CGCAATGAAG TGCCAGGGAT CACCGGAATC TCTCATTTCT TCGAGCACAT GATGTTTAAC
GGCTCGAAGA AATACGGCCC TAAAATGTTT GACCGCACCA TGGAAGCCGC TGGCGGCGCC
AACAATGCCT ACACCAGTGA AGACTTAACC GTGTATACGG ATTGGTTTCC CGCGAACGCG
TTAGAAACCA TGTTTGATCT CGAGGCTGAC CGCATTGCGC ACTTAGACAT TAACCCTGAA
ATGGTGGAAA GCGAGCGCGG TGTGGTGGCT TCAGAGCGCA CCACAGGCCT TGAGAATTCA
AATTGGCGCA CTCTGCAAGA AGCGTTGAAG GGAGTGGCTT TTAGCGCTCA TCCTTATAGT
TGGTCTGTAA TTGGCTATGA GTCAGATATT GCTGCCTGGA CCTTAGATGA TTTAGTGCAA
TATCATAAGA CCTATTACGC ACCTAACAAC GCTATCGTTG TCGTGGCAGG TGACGTTAAG
TTTGATGAAG TGAAGCGGTT AGCGACCCAG TATTTTGGTC CTATTCCAGC CCAAGCACCG
CCAAAAGCTG TGCGCACCGT GGAGCCTGAG CAGAAGGGTG AGCGTCGCCT CTTTGTTGAA
AAAGCCTCAG TGAGCACCCC CAATGTGATG CTGGCTTACC ATGTGCCAGC GACCAGCGAT
GAAGACTATT ACGCGCTTGA TTTACTTAAC TCTATTTTAA GCCAAGGTAA TAGCTCACGT
TTTTACAAAT CATTAGTAGA CAAGCAAGTG GCATTAGCCG CTGAAACTTA CCTGCCAATG
TCATTTGATC CTAACCTTTT CTATATTTTA GGTGTGGCAA ATCAAGGGGT TGAAGCCCAG
GTGCTTGAGA AAGCCATGAT AGCGCAAATC AACTTGATTT CCACTGAAGG CGTTAGCCAA
GATGAGCTTG AAAAAGTGAA AAATATCAAG CTAATGGAGT TCTACCAAAC CATGGAAACC
ATTAATGGCA AGGCAAACAC CTTAGGCACT TATGAGCTGT ATTTTGGCAG CTTTGAAAAA
CTATTCAATG CACCAGAAGC CTACAACAAG GTGACTCCAG CAGATATTCA ACGTGTGGCA
GCCAAGTACT TAGTTAAAGC TAATCGTACC GTGGGCGTAC TAGCAGCAAA AGAAGGGGCT
GAGTAA
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| Protein sequence | MKRSFTALTL LMGLVASSVA QATTAEDIKS FTLDNGMKIM VLEDASIPNA NMYLFWKVGS
RNEVPGITGI SHFFEHMMFN GSKKYGPKMF DRTMEAAGGA NNAYTSEDLT VYTDWFPANA
LETMFDLEAD RIAHLDINPE MVESERGVVA SERTTGLENS NWRTLQEALK GVAFSAHPYS
WSVIGYESDI AAWTLDDLVQ YHKTYYAPNN AIVVVAGDVK FDEVKRLATQ YFGPIPAQAP
PKAVRTVEPE QKGERRLFVE KASVSTPNVM LAYHVPATSD EDYYALDLLN SILSQGNSSR
FYKSLVDKQV ALAAETYLPM SFDPNLFYIL GVANQGVEAQ VLEKAMIAQI NLISTEGVSQ
DELEKVKNIK LMEFYQTMET INGKANTLGT YELYFGSFEK LFNAPEAYNK VTPADIQRVA
AKYLVKANRT VGVLAAKEGA E
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