| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3485 |
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| Symbol | |
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| ID | 4020039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4171187 |
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| End bp | 4172695 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957543 |
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| Product | peptidase M16-like protein |
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| Protein accession | YP_564483 |
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| Protein GI | 91794832 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.320343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACGC CAATCAAGAA TAAAACACCT CATCCTATCA AGGTTAACAA TAAGCTGGCC
CTAAGTGTGG CGTTAGCCTG CAGCTTAGGC TTAAGCGGCT GCGCAGCCAC GGCCAATAGT
GATACGGCTA AATCGGTTGC CAGCAAGCCG TTAGCGGCCA ATGTGCCAAG TGCGACAATC
AACCGTTTTG CTATGCCAGC TTATGAGACT GTGACCTTAG CCAATGGGCT AGTGATCAAT
TTAATGCCAC AAAAAGAAGT GCCATTAATC AGCTTAAATG CGGTGGTGCG CGTCGGTGCT
GTGGATGATA CGGTTTCAGG TTTGGCCTAT ATCGCCTCAC AAAGTTTGAT GTTAGGCGCG
GGTAAACTCA CCAAAGCCGA AATAGAGCAA AAAATTGATT TCTTAGGCGC TAGCATCAAC
ACCTCGGCGG ATAAAGAAGG CAGCTATGTG AGTGCCAACT TCATGGCTAA AGATGTCGAT
ACCTTATTGG CGATTTTCAG CGACGTCTTG CAGGCGCCAA GCTTTAATAG CCAAGAATTT
GATAAGTTAA AGCAGCGTGA AATCGCTGGC CTTGCTCAAG AGAAAGAAAG CCCAAGAGCG
GTTATTGGCC GCTATTTCGA TAAGCTCGCC TTTGGCGATC ATGCCTATGG CAAGCCGGTT
TCGGGTAACA GTGAGTCGGT GGCCAAGATA AGCGTGAATG ACTTGTTGGC GTTCCACTCA
AGCCATTATC TTCCTGCTAA CACTGCCATC AATGTGGTCG GTGATTTTGA ACCAAGCGCC
ATGAAAGCTA AGCTTGAAGC CGCTTTCGGA GGCTGGCAGG GGACTAAAGC AGAATCTAAC
GTGGACTTAA GTGCCGGCCT TGCGGATTTC AGCCAAAGCC GAGTGCTGTT GGTGGATAAG
CCGGATGCCA TAGAGACCAC TTTTCTGATT GGTGGTAAAG GCATCAGCCG TGACAACCCA
GATTACGTTG GCTTGACTGT GGTGAACACC ATCTTAGGTG GCCGCTTTAC CTCATGGCTC
AATGATGAAC TTAGGGTTAA CGCAGGGTTA ACCTATGGTG CTCGCTCAGG GTTTACGCCT
TACTCTAAGG CTGGGGTGTT CCAAATTAGT ACCTTTACTA AGTCTGAAAC CACCAAGGAA
GCCATAGATC TTGCCCTGAA AACTTACGCC AGATTGTGGC AGAAGGGCAT AGATCAAGGA
ACGTTAGATT CGGCGAAAGC TTATGTTAAA GGCCAGTTCC CGCCTAAGTT TGAAACCAGT
GGTCAGCTTG CTGGATTATT AGCCGACATG TACCTCTATG GCTTTGATGA TAATTTTATT
AATCAATTCC AAGCTAAGGT CGATGGCTTA ACCCTAGAGG AGACCCAGCG ACTAGTGCGC
GACTATTTCC CACAGGAAAA CCTGCAGTTT GTGCTGATAG GTAATGCCAG CGTGATAGCG
CCGATTGCCG CTCAATACGG TGAAGTCACG CAGGTCGATA TTAAAGCCAT GGGCTTTGAT
GCTAAGTAA
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| Protein sequence | MTTPIKNKTP HPIKVNNKLA LSVALACSLG LSGCAATANS DTAKSVASKP LAANVPSATI
NRFAMPAYET VTLANGLVIN LMPQKEVPLI SLNAVVRVGA VDDTVSGLAY IASQSLMLGA
GKLTKAEIEQ KIDFLGASIN TSADKEGSYV SANFMAKDVD TLLAIFSDVL QAPSFNSQEF
DKLKQREIAG LAQEKESPRA VIGRYFDKLA FGDHAYGKPV SGNSESVAKI SVNDLLAFHS
SHYLPANTAI NVVGDFEPSA MKAKLEAAFG GWQGTKAESN VDLSAGLADF SQSRVLLVDK
PDAIETTFLI GGKGISRDNP DYVGLTVVNT ILGGRFTSWL NDELRVNAGL TYGARSGFTP
YSKAGVFQIS TFTKSETTKE AIDLALKTYA RLWQKGIDQG TLDSAKAYVK GQFPPKFETS
GQLAGLLADM YLYGFDDNFI NQFQAKVDGL TLEETQRLVR DYFPQENLQF VLIGNASVIA
PIAAQYGEVT QVDIKAMGFD AK
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