| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3484 |
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| Symbol | |
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| ID | 4020038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4170591 |
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| End bp | 4171052 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637957542 |
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| Product | RNA methyltransferase TrmH, group 2 |
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| Protein accession | YP_564482 |
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| Protein GI | 91794831 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCCATA TCGCGCTGTA TGAGCCAGAA ATTGCCCCAA ACACGGGTAA CATAATTCGA
CTATGTGCCA ACAATGGATC ACACCTGCAT TTGATTGAAC CCTTAGGGTT TGATTTAGAA
GAAAAAAAAC TTCGCCGCGC GGGCCTGGAC TACGCCGACT TAGCCAACGT GACTCGCCAC
AAAAACTATG ATGACTTTCT TCAAGCTATG GCTGGAAAGC GCATTATGGT GTGTACCACC
AAAGGCAGTC GCCCACACAC TGAACTTGAG TTCGCCAAAG ATGATGTACT CTTATTTGGA
CCAGAAACCC GCGGTTTACC TATGGACATC ATCAATGCCG CGCCACTCGA ACAACGCTTA
CGTATCCCCA TGATGAGTAG CAGCCGCAGC CTAAATTTAT CTAACTCTGT GGCCATCATA
AGTTATGAAG CTTGGCGTCA ACTGGGTTTT GAAGGGGCCT AG
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| Protein sequence | MFHIALYEPE IAPNTGNIIR LCANNGSHLH LIEPLGFDLE EKKLRRAGLD YADLANVTRH
KNYDDFLQAM AGKRIMVCTT KGSRPHTELE FAKDDVLLFG PETRGLPMDI INAAPLEQRL
RIPMMSSSRS LNLSNSVAII SYEAWRQLGF EGA
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