| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3482 |
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| Symbol | |
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| ID | 4020036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4167942 |
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| End bp | 4169117 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957540 |
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| Product | nitrite reductase, copper containing |
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| Protein accession | YP_564480 |
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| Protein GI | 91794829 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA AGACTTCTAC AACTCAAAGC ACGGTGAACG AACAGCGCCG TAATTTTATC
AGCGGTTCGA TTGGTGCAGG CCTTGTGGGC GCAGGTATTG CTGCTGGGCT AGTGTCATCG
TCGGCCCAGG GAGCCACAGG TAAGAAACTT GACCGTATGG CCAATTACAC CGCCGATCAA
CTCGAGCGTG TGAAGCAAGT TCTAGTGGCG CCCCCTATGG TGCCCGTGCA TGAGCAAGTG
GCTAAGGGTA AGCCCAAGGT TATCGAAGTC CGTCTTGAGG TAGAAGAGAA ACAAATTGAG
CTTGAAAATG GCACTAAAGC TTGGGTATGT GCCTTCAACG GCAGCGTGCC TGGGCCACTC
ATTGTGTGCC ATCAGCATGA TTATGTTGAG CTGACCTTAG TGAATCCTAA GACCAATATG
CTGGCGCATA ATATTGACTT GCACTCTGCC ACAGGTGCAT TGGGTGGGGG GGAGTTAACC
TTAGTGTCAC CCGGTGAGAC TGTCACCTTC AGATTCAAAG CCACTAAAGT GGGAACTTTC
GTGTATCACT GCGCACCTGG TGGGGTGATG ATCCCATGGC ATGTGGTGAT GGGTATGAAT
GGCGCCATTA TGGTATTACC CCGTGAAGGC TTAAGTGACG GTGAGGGTAA TCGCCTAACC
TATGACAAGG CCTATTACAT AGGTGAACAG GACTTCTACA TAGCTAAAGA TGATCAAGGT
AAATATAAAG CCTATGACAC TGTGATGGGC AGCATGAATG ACACCTTAGA GGTAATGAAG
ACACTCACGC CATCCCATGT GGTATTTAAT GGCGCCGTGG GTGCGTTGAC AGGCAAAAAC
TCCATGACAG CCAAGTTGGG TGAATCTGTG TTGTTTATTC ACTCACAAGC CAACCGTGAT
ACCCGCCCAC ACATTATTGG CGGTCACGGC GACTATGTGT GGAACACAGG CTCATTTAGC
GACCGTCCAG CTCGTGATTT AGAGACTTGG CACATTGCCG GTGGTTGTGC TGGTGCGGCT
TTATACACCT TCTTACAACC CGGTCTATAC GCCTATGTGA ACCATAACCT GATTGAAGCC
ATCATGAAGG GCGCAGCGGC GCACATTAAG GTAGAAGGTG AGTGGAATGA CGACTTGATG
ACTCAAGTGA GCAAGCCGTC ACCCATTAAG GCTTAG
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| Protein sequence | MENKTSTTQS TVNEQRRNFI SGSIGAGLVG AGIAAGLVSS SAQGATGKKL DRMANYTADQ
LERVKQVLVA PPMVPVHEQV AKGKPKVIEV RLEVEEKQIE LENGTKAWVC AFNGSVPGPL
IVCHQHDYVE LTLVNPKTNM LAHNIDLHSA TGALGGGELT LVSPGETVTF RFKATKVGTF
VYHCAPGGVM IPWHVVMGMN GAIMVLPREG LSDGEGNRLT YDKAYYIGEQ DFYIAKDDQG
KYKAYDTVMG SMNDTLEVMK TLTPSHVVFN GAVGALTGKN SMTAKLGESV LFIHSQANRD
TRPHIIGGHG DYVWNTGSFS DRPARDLETW HIAGGCAGAA LYTFLQPGLY AYVNHNLIEA
IMKGAAAHIK VEGEWNDDLM TQVSKPSPIK A
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