Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3477 |
Symbol | |
ID | 4020031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4163852 |
End bp | 4164778 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637957535 |
Product | hypothetical protein |
Protein accession | YP_564475 |
Protein GI | 91794824 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.317909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTA ATCAAGAAGA CAGAATTAGC CCAACCACAG AAAAGCCGTC ATCAGGCAAC AACACTCCCC TTATCGCTAT TGCCGTCATT GCCTTATTGG CCGTGGGCGG TTATTTCTAC ATCAGTAGCG ATAGCGATGA AATGCCAGAA CAACTGATAA CTCCAGTAGA GCTGCCTGAC AGTATCCCTA CCACGCCTAT CGAGCAAGAT CCTATCGAAG AGCAAGAGCT AGCTGCAACA GGTATACCCT CTTCACAAAT AGAGGGCAAC AATAGCCAAG AATTATCAGG CACAACAGAT CAACAGACAG CTAACCCAGC AGACGCTAAG CCGGTCGAAC CTTTACCAGC CCTAGCCGAA AGTGATGATT TTATCGAATC GAAAACCTTA GCCATTGCCA ATGGTATGAA GATAGAGCCG CTGATTTTAA AGAAAGATAT GGCGCGCCAG TTCGTGGTTT TTGTGGATAA CTTAGCTCAA GGTGAGCTTG TCCGTAAGGC AAGCCCTATC AAGGGGCCAG ACCGTAACTT TAGCGTCAGC GAAATTACCA ATAAGATTTT CATCAATCCA GACAGTTTCC ACAGATATGA TCTCTACGCA AACTTCGTTG CCGGCCTTAA TGAGCAAGAG CTACTCAGTA CCTACAAGGA GCTCACGCCT TTGTTTAACG AAGCCTTCGA AGAGCTGGGT TACAGCGACG TCAGCTTCGA TGCAAGAATG CAACAAGCGA TGAAGATGGT GCTGGATGCC CCTATCATAG AAGATCCCAT CGAACTTAAG TCTGTCACTG TGAACTACCA CTTTGCCGAA CACAATTTAG AAGCCTTACC CAACGCACAA AAATTCTTGA TCCGTATGGG CCCAGAAAAC ACCCGCAAAA TAAAAGCCGC GGTGAAAAAA CTGCAACTGC TATTAGACAA TCAATAG
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Protein sequence | MQVNQEDRIS PTTEKPSSGN NTPLIAIAVI ALLAVGGYFY ISSDSDEMPE QLITPVELPD SIPTTPIEQD PIEEQELAAT GIPSSQIEGN NSQELSGTTD QQTANPADAK PVEPLPALAE SDDFIESKTL AIANGMKIEP LILKKDMARQ FVVFVDNLAQ GELVRKASPI KGPDRNFSVS EITNKIFINP DSFHRYDLYA NFVAGLNEQE LLSTYKELTP LFNEAFEELG YSDVSFDARM QQAMKMVLDA PIIEDPIELK SVTVNYHFAE HNLEALPNAQ KFLIRMGPEN TRKIKAAVKK LQLLLDNQ
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