Gene Sden_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3468 
Symbol 
ID4020022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp4151505 
End bp4152782 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content43% 
IMG OID637957526 
Producthypothetical protein 
Protein accessionYP_564466 
Protein GI91794815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA TTTTTTTGAT CCTGGGGTGT GCCAAGCAAA GGTGGCAAGA TCTAGAAATT 
ATATGTGAGT ATGTCAAAAA AACTTACAGT TTGACTACCA TGCTTATGGT AAATAAGGCC
CATAAAGAGT TTTATTCAGT TTGCGATCAG GTTATAGAAG TCGATTTAAG TGATCAGAAC
TTTATTGCAT TAGCATCTCG TTTATTGAGT GAGCAGAAAG TGAGTGGTGG ATTGTTGTTT
GCTGATCAGG CTCTATTGCA TGGCACTAAA TTGTTTGAGC AGCTTGGGAT TGTGTGTGAC
AACTCCGAGT TGGGGATCAA TTCGTATTCT AAGCTTGAAT TCAGGCGCCA AGAAAAGCGT
TATTTCTCCC ATGCAGCTAA AACGCATTAC TTCGTGCCCG AATTTTCGAA AGTGAATAGC
CTACAAGATG TACATGCATT TGCCGTCAAG TACCCAGATG GTTTTATTCT TAAGCCTATT
AGCGAAGGTG GGAGTCGTGG TGTACTTAAG TTGCATGCAC AATCAGATTT TGGAGCGGCT
TACAAACAAG TTGAATGCTA TCAGGCTGAT GGCTTGATGT GCGAGCAACT TATCCCAACT
TTTCGTGAAT TCTCCTTTGA TGGTGTGGGA GATATATCGT TTATCACAGA GAAACTGGTC
GCAACTGGTG CTCACCCTGT TGAAGTCGGT CAGATTGTAC CAGCAGAGTT AACTTGTGAT
TCTGCTGAGA AAATTAGTGC TCACGGCCGG TTGATGAATC TTTGGGTGGG GCAACAGCTT
GGAGCATTCC ATAATGAAAT TGCTTACTTG GAGAGTCAAG GATCTACCGC TGCTATAGAA
TCGAATCGAC GTTCTGGTGG TATGGGGATA TGGAATCTAG CCGAAAAGGT GTTTGGTGAG
AATCTATTTC ATCGATGGGT TGATGTGGCT ATGGGTCAGA CAGTGGAGCA CATTCCATTG
AATGCGACAG GCAAAGCGAT GTCTTGCATG TTAGGCAGCC GTGAAAATTT GATTGATGAT
TTGACAATGA TAACGGCTCA AATACAAGAA GTACTAGCGT TTGAGCTTGG CCCTGATATC
GAGTTGTTTT CGTTACGTTG GTTACATACC CAGCCACATA TGCTCCCCTC AATCCCCCAG
TCTAATTTCG ACTTTCTCGC TGAAGCCTGT ATCTATTGTG CTCACTTCGA TTTGTCGAAT
CAAGCCTTAT ATGAGCGGGT TCAGCGAGCG TGGGACAAAT GCCTTTATAT AGGGATGAAA
GAGGAAAAAT GCGCATGA
 
Protein sequence
MNNIFLILGC AKQRWQDLEI ICEYVKKTYS LTTMLMVNKA HKEFYSVCDQ VIEVDLSDQN 
FIALASRLLS EQKVSGGLLF ADQALLHGTK LFEQLGIVCD NSELGINSYS KLEFRRQEKR
YFSHAAKTHY FVPEFSKVNS LQDVHAFAVK YPDGFILKPI SEGGSRGVLK LHAQSDFGAA
YKQVECYQAD GLMCEQLIPT FREFSFDGVG DISFITEKLV ATGAHPVEVG QIVPAELTCD
SAEKISAHGR LMNLWVGQQL GAFHNEIAYL ESQGSTAAIE SNRRSGGMGI WNLAEKVFGE
NLFHRWVDVA MGQTVEHIPL NATGKAMSCM LGSRENLIDD LTMITAQIQE VLAFELGPDI
ELFSLRWLHT QPHMLPSIPQ SNFDFLAEAC IYCAHFDLSN QALYERVQRA WDKCLYIGMK
EEKCA