Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_3462 |
Symbol | |
ID | 4020016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 4142874 |
End bp | 4144289 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637957520 |
Product | ATP-binding region, ATPase-like protein |
Protein accession | YP_564460 |
Protein GI | 91794809 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.015081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGCAA ATCTTCGTCT TCCCAGTAAT TTATTCATTA AGCTGTTGCT CGGCTTCTGG CTCTGTAGCT CAGTTATCAT CGCCTTTGTC TCGCTACTGC CTTTATTACA ACAAAGCCAT GACAGGGCGC CACTGACACC GCAACTGCAA CAATTATTAG TGCGCGCCAG TGAGCGCATT CAAGATCATC CGCGAATACT GAGTCATGGC TTTCCCGTTA GCGGCCGGCC GATGAGGCAG CCACCAAGAG ATCCCCCTGT AAGACGCAGT GCCCCCTTCG AGCGTGCCAG CTTTTACTTA TTAGATGCCG AAGGTCGAAT ACAACACACA CGTCACCCCA CCCGCGCCTT ACGAAAATTT ATCCTCATGG CCGAAGAAGC CGAGCAGGCC ATCAGCCATC AATTTAAAAA TGAGTTATTC TTTGGCCCCT ATGCCTTTAA GGTTAATGGC AAGGCTTACC AAATCATAGG TAGATTGCCA GACCATCACC CTAGGCCGTG GTTTTTCTTC TTCGCCGACA ACAAGTTGCT TACCGCCGCC ATCGCCATTT TCCTCTCAGG CCTACTTTCC GCCCTGCTTG CTTGGTATTT GGGCAAGCCA CTCAGCTCCC TAAAGCGCAG TGCCCATGCG CTCGCCAAGG GAGATTTAAC CAGCCGGGTG AGTGAGCGCA TCACTCACAG GCAAGATGAA ATGGGTCAGC TGGCGAGCAC CTTTAATACC ATGGCCGATG CAGTGCAGAG CATGGTAAAC AACCAACAGC GATTAATGGG GGATATCTCC CATGAACTGC GCACCCCACT GACGCGGTTA CAACTTGCCT TGGCCTTGGC CCGTAAGAAG GGCCAGCACA GTGAAGAATT AGAGCGCATA AGTTATGAGG CCCTGCAGCT TGAAGCGCTA ATAAGCGAGC TACTGACCCT ATCGCGAGTG AGCTTAGCCA ATCATGAAAA TAAGCGGCGC CTTGGCCTCG CCGAATCCTT AAGCCAAGTG CTGGATGACG CCGAATTTGA AGCCGAGCAA CAAGGGAAAC ACTTGCAGGT TGTTGTTGAC GAAGCCTTGC AGTTAAGCCA CTACCCTAAG GCATTGAGCC GCGCCATAGA AAATCTACTG AGAAACGCCA TTCGCTATGC CAGTGCCAAC ATCACCATAG CGGCGGTACT CCAAGGTGAA CAAGTAGTCA TTACCATCCA AGACGATGGC CAAGGCGTGC CGGAAGCTGA GCTTGAAGCC ATTTTCAAAC CCTTCTATCG CCCCGATAGC GCCCGCGACC GACAAAGTGG CGGCTGGGGC CTAGGCCTTG CCATCACGCA AGCTGCCATT CACCTACACC AAGGCAGCAT CATCGCCGAA AATCTCAGTG CCAGCCGTGA TAAACAACAG GGCCTAAAAC TCACCATCAA GTTACCTGTG AGTTAA
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Protein sequence | MMANLRLPSN LFIKLLLGFW LCSSVIIAFV SLLPLLQQSH DRAPLTPQLQ QLLVRASERI QDHPRILSHG FPVSGRPMRQ PPRDPPVRRS APFERASFYL LDAEGRIQHT RHPTRALRKF ILMAEEAEQA ISHQFKNELF FGPYAFKVNG KAYQIIGRLP DHHPRPWFFF FADNKLLTAA IAIFLSGLLS ALLAWYLGKP LSSLKRSAHA LAKGDLTSRV SERITHRQDE MGQLASTFNT MADAVQSMVN NQQRLMGDIS HELRTPLTRL QLALALARKK GQHSEELERI SYEALQLEAL ISELLTLSRV SLANHENKRR LGLAESLSQV LDDAEFEAEQ QGKHLQVVVD EALQLSHYPK ALSRAIENLL RNAIRYASAN ITIAAVLQGE QVVITIQDDG QGVPEAELEA IFKPFYRPDS ARDRQSGGWG LGLAITQAAI HLHQGSIIAE NLSASRDKQQ GLKLTIKLPV S
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