| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3459 |
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| Symbol | |
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| ID | 4020013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4140425 |
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| End bp | 4141312 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637957517 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_564457 |
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| Protein GI | 91794806 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000668227 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGACTA TGACGCCAAG TTCTACTGAA ACTAATTATG ATTTTTGGGT AAAGCTCGCC
AGCCGAGCAG CCATTACTGT GGCATTTACC TTGATTGCCA TTAAGCTGGC AGCCTGGCTC
TATTCAGGCT CTGCCAGTAT GCTGGCTTCC TTGACCGACT CCGTTGCCGA TGCACTAGCG
TCAGTGGTTA ATTTTATTGC CATTCGCTAT GCCATCGCCC CCGCCGATAA AGAACACAGA
TACGGCCACG GTAAAGCCGA GCCTTTAGCG AGTTTGGCGC AAGCGGCGTT CATTTTAGGT
TCGGCATTCT TGTTGCTGTT TTATGGCGCC GAGCGGTTAA TCAATCCTGT AATCATGGCC
CATACGGATT TAGGCATTAT TGTCTCACTT ATCGCCATAG TGCTGACTTT TGCGTTAGTA
CTAGTGCAAA AACGCGCCCT AGCGCAGACA CAAAGCAGTG TCGTGGCGGC CGACGCCTTA
CACTATAAAT CTGACTTGTT GCTTAATGCT TCAGTGGTGC TGGCGTTGGT GCTAGCTCAG
TACGGTTGGT GGTGGGCCGA TAGTGTGTTT GCCATCGCTA TCGCACTATT TATTGGGGCT
CAGGCGTTGG GGCTTGGCTA TACGTCGGTG CAGACTTTGC TCGACCGTGA ACTCGACTCA
CAGACTCGGC TTAACATTAT TCAGCTGGCC CAAGCGGATG CTAGGGTGCG TGGGGTGCAT
GATTTGCGTA CCCGTCAGGC GGGGAAGACC ACCTTTATTC AGCTGCATTT GGAGCTCGAT
GGCCAACTTA GCCTTAAGGA CGCTCACAGC ATAGCTGCCG ATACGGACTT AAGGATAAGG
GCGGCGTTCG ATGATGCTGA GGTGATAATC CACCAAGACC CTGTCTAA
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| Protein sequence | MPTMTPSSTE TNYDFWVKLA SRAAITVAFT LIAIKLAAWL YSGSASMLAS LTDSVADALA
SVVNFIAIRY AIAPADKEHR YGHGKAEPLA SLAQAAFILG SAFLLLFYGA ERLINPVIMA
HTDLGIIVSL IAIVLTFALV LVQKRALAQT QSSVVAADAL HYKSDLLLNA SVVLALVLAQ
YGWWWADSVF AIAIALFIGA QALGLGYTSV QTLLDRELDS QTRLNIIQLA QADARVRGVH
DLRTRQAGKT TFIQLHLELD GQLSLKDAHS IAADTDLRIR AAFDDAEVII HQDPV
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