Gene Sden_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_3456 
Symbol 
ID4020010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp4137147 
End bp4137701 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content47% 
IMG OID637957514 
Producthypothetical protein 
Protein accessionYP_564454 
Protein GI91794803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0467663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACAC TTTTATACCC AAGCCTGCTA TTAAGCGCTT TCCTCGCAAG CTTACTGCTA 
GCAGGCCCTG CAGCTGCCGA TACCGTCTAT CGTTGGGTGG ATGAAAATGG CAAGGTGCAC 
TATTCAGATA CGCCGGTAAA AAATGCACAG GTGTTTGACT CAAAAGAAAA CACCCGCAAT 
GAAGTCAAAG TCAGCCACGG CAACATAAAA AACCAAGACC AAGCAGAGCC CATCGCAGAT 
GCTGATATCC AATACCAAGT CAACATAGTC TCACCCACTG AAGAGGCGAC GGTCAGGGAT 
AACAATGGTG ACTTCAGTGC CCAGATATCG ATATTTCCAG AGGCGCCAAG AGGCACATTA 
ATCCAATTAG TCTTAGACGG AAAGCCCTAT GGCCAAGCTC AGACTAGCCC CAATTTTGAT 
CTCAAAGCCG TCGAGCGTGG TGAACACTCC CTTATTGCCC AACTTGTCAG CCAAAGCGGC 
AAAGTCCTTG CATCTAGTTC CTCGAGAAGA ATTTTTCTTC ATCAAGCGAA CATTAAACCT 
CAAGTAACCC CTTAA
 
Protein sequence
MRTLLYPSLL LSAFLASLLL AGPAAADTVY RWVDENGKVH YSDTPVKNAQ VFDSKENTRN 
EVKVSHGNIK NQDQAEPIAD ADIQYQVNIV SPTEEATVRD NNGDFSAQIS IFPEAPRGTL 
IQLVLDGKPY GQAQTSPNFD LKAVERGEHS LIAQLVSQSG KVLASSSSRR IFLHQANIKP 
QVTP