| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3448 |
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| Symbol | rbn |
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| ID | 4020002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4127109 |
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| End bp | 4128050 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637957506 |
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| Product | ribonuclease BN |
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| Protein accession | YP_564446 |
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| Protein GI | 91794795 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.016816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATATAC AACAACAGAC ACGTGGATTT CGCTATTTCT ATATATCCGT TTGGCGATTT
ATCTTACATC TAAAAGCCCG TTTGATTGAT GATCAAATCA ATATTCGTGC CGGACATTTG
GCTTATGTGA CCTTGCTTTC CTTAGTGCCT ATGATAGCCG TGACCATGTC CATGCTATCG
GCCTTCCCCG TTTTTAAAGG CATACGTGTC AATATAGAGT CCCTCGTTTA TTCATATTTT
TTACCCGCAG CAGGGGATTC GGCTCAGGTC TATATCAATG AGTTTGTTAA TAATGCTTCT
AAAGGAACCT TCGTCGGCAT CATTGCCTTA TTAGTTGTGG CTATTCTATT GATATCGGCG
ATAGACAAGG CATTGAACAA TATCTGGCGA ACAACGGAAA AACGCTCCTT AGTGGTGTCC
TTTTCGATGT ATTGGATGGT ACTGACTTTA GGGCCAGTAT TAATGGGGTC AAGTTTAGTG
GCCACCTCTT ATGTGGTCTC CCTCGAGCTC TTTAGTCAAA GTGAATTATC TGGTCTGTTA
CCTTGGCTGG TAGAACGATT ACCTATGCTG TTCTCTGTGG CATCTATCTT ATTACTGTAT
ATGGTAGTGC CGACTCAAAA AGTGAGGTTT TTCCACGCCT TGCTCGGTGC AGTGGTGGCG
GCGCTACTAT TTGAGGCGGG TAAGCGTGCC TTTGCCTATT ACGTGACTCA ATTCCCAAGT
TATGAAGCCA TCTATGGTGC ATTGGCCACA ATTCCAATCT TGTTCGTTTG GGTGTATTTA
TCTTGGATGA TAGTGCTGGT GGGTGCCGAA ATAACTGCGG CTCTGCCTGA GTACTTAGAC
GACCCTTTCG AAAAGGACGG CACTAAGGCA ACCACAGCCT TGACTGAAAA TAAGGAAGTA
GATGAAAGTG AGCCTAATCA GGGTAACGAT ACGATAGCGT GA
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| Protein sequence | MDIQQQTRGF RYFYISVWRF ILHLKARLID DQINIRAGHL AYVTLLSLVP MIAVTMSMLS
AFPVFKGIRV NIESLVYSYF LPAAGDSAQV YINEFVNNAS KGTFVGIIAL LVVAILLISA
IDKALNNIWR TTEKRSLVVS FSMYWMVLTL GPVLMGSSLV ATSYVVSLEL FSQSELSGLL
PWLVERLPML FSVASILLLY MVVPTQKVRF FHALLGAVVA ALLFEAGKRA FAYYVTQFPS
YEAIYGALAT IPILFVWVYL SWMIVLVGAE ITAALPEYLD DPFEKDGTKA TTALTENKEV
DESEPNQGND TIA
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