Gene Sden_3446 details

Gene Information

• Locus tag: Sden_3446
• ID: 4020000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 4126009
• End bp: 4126587
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637957504
• Product: thioesterase, putative
• Protein accession: YP_564444
• Protein GI: 91794793
• TIGRFAM ID: [TIGR02447] thioesterase domain, putative

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000290362
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAGCA TCAGCACAGT GGCAATGACA GAGACAGCAG CAGAAACACA AGATGCCAAG 
GGCTGCGATC TTATAAAGAG AGATCTGCTC AGCCAACTTG AACGCACTTG GCACCAGACA 
ATCCCAGTTA GTGAGTTTAT GCAAATAGCG CCGCTCAGTT TTGATGATGA AATGTTCACG 
GTGACAGCCC CATTAACCCC GAATATTAAT CTACATCAAA CTATGTTTGC CGGCAGCATC 
TATACCTTAA TGACACTAAC AGGTTGGGGC ATGGTGTGGT TACAGCAAAA GCGTCAGGGT 
ATAACAGCAG ACATAGTGCT AGCCGACGCC AAAATAAAGT ATCACGCGCC AGTGACTGAA 
GCTCCAATGA GCCAAGTGAT TTGGCCAGCG TCTACTAAGG CGCAGCTTGA CAGCCAAACT 
GAAAGCCAAG CAACTGCGCC CTTAATATTG AATAGTGACT TTGCTGACTT ATACCGTCGC 
AACAAGATGA GCCACCACTT AGAAGTGCAC CTTTATAGCG GTAAAATCTT ATGTGCGACC 
TTTAACGGCC GTTATGTGTC ACTTAAAAAG CCAATATGA 

 

Protein sequence

MDSISTVAMT ETAAETQDAK GCDLIKRDLL SQLERTWHQT IPVSEFMQIA PLSFDDEMFT 
VTAPLTPNIN LHQTMFAGSI YTLMTLTGWG MVWLQQKRQG ITADIVLADA KIKYHAPVTE 
APMSQVIWPA STKAQLDSQT ESQATAPLIL NSDFADLYRR NKMSHHLEVH LYSGKILCAT 
FNGRYVSLKK PI