| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3427 |
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| Symbol | |
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| ID | 4019975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4092521 |
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| End bp | 4093201 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637957479 |
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| Product | nucleotidase |
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| Protein accession | YP_564425 |
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| Protein GI | 91794774 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAG CTTACCAATG GATTTTGTTC GACGCCGACG ACACTTTATT CAGTTTTGAC
GCCTTTGCTG GCCTTAAGCA GATGTTTGCC GATTTTGATT TAGATTTCAG CTTAGATGAT
TTTAGTTTTT ATCAGACCAT CAATAAGCCG CTGTGGGTGG ATTATCAGGA TGGCAAAATT
AGCGCTAAAG AATTGCAAAA TAACCGCTTT ATTCCTTGGT CGCAAAAACT GGGTGTCTCA
ACGCAAACCC TTAATAGCGC CTTTTTAACT GCCATGGCCG ATATATGTCA GCCGCTTCCC
GGTGCCCGAG AGTTGGTGGA CGCGTTAACC GGTAAGGTCA ATTTAGGCAT TATTACCAAT
GGTTTTACTG AGCTTCAACA AATACGCCTA GAACGCACTG GCTTTAGCGG CGCTTTTTCT
CCTGTAGTGA TTTCAGAGCA AATCGGTCAG GCAAAACCTC ACGCAAGTAT TTTTGAACAT
GCATTCTCTT TAATGGGTCA CCCAGCTAAG GACGGTATTT TAATGGTAGG TGATAACCTG
CATTCGGACA TACTCGGCGG TATTAATGCC GGTATAGATA CTTGCTGGCT CAATCACCAT
GGTGCGGCGA CAAGCAATGG CATAACTCCC CGCCATCAGG TGGCGTCACT CACTGAGCTG
AAGGCTTTGT TACTAGGATA A
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| Protein sequence | MKLAYQWILF DADDTLFSFD AFAGLKQMFA DFDLDFSLDD FSFYQTINKP LWVDYQDGKI
SAKELQNNRF IPWSQKLGVS TQTLNSAFLT AMADICQPLP GARELVDALT GKVNLGIITN
GFTELQQIRL ERTGFSGAFS PVVISEQIGQ AKPHASIFEH AFSLMGHPAK DGILMVGDNL
HSDILGGINA GIDTCWLNHH GAATSNGITP RHQVASLTEL KALLLG
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