| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3409 |
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| Symbol | |
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| ID | 4019957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 4066774 |
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| End bp | 4068303 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957461 |
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| Product | permease |
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| Protein accession | YP_564407 |
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| Protein GI | 91794756 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTCG CTAATTTTGC TGAACTCTTT TTAGAATCGG CGCCTTGGTT ACTGTTAGGC
CTGATATTGG CCGGACTACT CAAAGTCTTT GTGCCCATGG CGTGGATGCA AAAACAGCTT
GGTGGTCACG GGGTTAAATC TGTGGTCAAG GCTGCCTTAA TTGGTGCGCC GCTGCCCTTA
TGTTCTTGCG GCGTTATCCC CGCTGCCGTT GGGCTTCGCC GCTCTGGTGC TTCAAAAGCG
GCCACCACTT CATTTTTAGT CTCCACTCCA GAAACTGGCG TCGACTCCAT TACTGTGTCT
TATGTGTTAC TCGGACCTTT TATGGCCATC ATCAGACCCA TAGCCGCCAT TACCAGCGCC
ATAGTCGCTG GACTTTTGGT TGGCAAAGAT GAAGCTGAAC CGAGTAAACC CGTAGCAACG
TCTGCACCGA CAAGCCCCAG CAATATGGCG GAAACGCCCT CAAAAAGTTG TTGCTGTGCC
AGCAAAGCTA GCCCAGCGGT CACCGTAGAA GCTGTGGTAA AATCTAGCAG CAGTTCATGC
TGTGCCAGCA CTAAAACCGA CACTGCTGCA CCAGTTAGCA ATGCCAGCTC ATGCTGCCCA
AGCAGCAAAA TTGATCCACC TGAAATAAAC ATAGCCAATG CCGAGGCTGA CACTGCAGCG
CCGGAGTTAT TTAATGAAAT CGCAGCACCG ACACCAGTAA AGACCAGCTC ATGCTGCGCA
AGTACTAATA CGGATACAAG TACTAATACA AGTACTAATA CAAGTGAAAG TACTGTAGCT
GAAACTGCAG CGCCAAACGC TATCGCGGGC ACTGCAGCCA CTAAAACCAG CAGCTGTTGC
GCGAGCGTTC CTGAGAGTAA AATTGTGAGT AAGGACACCC ACTCTCACAC TGAAAGCACA
GATAGCGAGG CTTGTTGCGC CGCCACCCAA GACACGGCGA CTGAGCTTAA AGATGAGTCT
ATTATCAGCC GCATTGGCAC TGGATTACAT TACGCCGCCA CTGATTTAGT CCGCGATACC
ACCATGTGGT TATTGGTGGG GTTATTTTTT GCCGCATTAG TGCAAACCTA TGTTCCTGCA
GACTTCTTAG CTCAATGGGG CGATGGCATC TTAGCTATGC TAGTGATGGT AATAGTGTCT
GTACCTATGT ATATCTGCGC CACAGCATCG ACGCCAATTG CCGCAGGTTT ATTATTAGCA
GGGGTTTCAC CCGGCGCGGT ACTGGTATTT ATGATGGCAG GGCCTGCAAC CAATATCGCG
ACTTTAGGCG TGGTGGTAAA AGAGCTAGGC AAACGCGCCT TGTTTGGTTA TCTCGGCGGT
GTATTAGGTG TGGCGCTGGC CTTTGGGATA TTGGTGAACT ATCTAGTGGA TACGTTTGGC
TTCGTGGTAA TGCCACAAAT TGGTGAGGAG CACGCCTTGT TGCCACACAG CCTAGTGGTG
ACTTCTGGCA TTATATTGGC AATCTTAATG GCTAAAGTGA TTGTCGATAA AATCCCAAAG
AAAGCCCTAA GACGAGATTG CTGCTCGTAA
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| Protein sequence | MLFANFAELF LESAPWLLLG LILAGLLKVF VPMAWMQKQL GGHGVKSVVK AALIGAPLPL
CSCGVIPAAV GLRRSGASKA ATTSFLVSTP ETGVDSITVS YVLLGPFMAI IRPIAAITSA
IVAGLLVGKD EAEPSKPVAT SAPTSPSNMA ETPSKSCCCA SKASPAVTVE AVVKSSSSSC
CASTKTDTAA PVSNASSCCP SSKIDPPEIN IANAEADTAA PELFNEIAAP TPVKTSSCCA
STNTDTSTNT STNTSESTVA ETAAPNAIAG TAATKTSSCC ASVPESKIVS KDTHSHTEST
DSEACCAATQ DTATELKDES IISRIGTGLH YAATDLVRDT TMWLLVGLFF AALVQTYVPA
DFLAQWGDGI LAMLVMVIVS VPMYICATAS TPIAAGLLLA GVSPGAVLVF MMAGPATNIA
TLGVVVKELG KRALFGYLGG VLGVALAFGI LVNYLVDTFG FVVMPQIGEE HALLPHSLVV
TSGIILAILM AKVIVDKIPK KALRRDCCS
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