| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3406 |
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| Symbol | |
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| ID | 4019954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4062857 |
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| End bp | 4064155 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637957458 |
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| Product | phosphoribosylamine--glycine ligase |
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| Protein accession | YP_564404 |
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| Protein GI | 91794753 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
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| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.586038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TGGTTATCGG TGGTGGCGGT CGTGAACATG CCTTAGCCTG GAAAGCAGCA
CAGTCCCCGC AAGTTGATAA GGTATTTGTC GCGCCAGGCA ATGCCGGCAC CGCGCTTGAG
CCTAAGCTAG AAAATGTGGC CATAGAGGTG ACAGACATCC AAGCTTTAGT GGCCTTTGCC
AAAGACAATC ACATCGAGCT CACCATAGTG GGCCCAGAAG TGCCGTTAGT GTTAGGGGTT
GTCGATGCGT TCAATCTAGC TAACTTACCT ATTTTTGGCC CAACCCAAGG CGCGGCCCAG
CTTGAAGGCT CAAAAGCCTT CACCAAAGAT TTCTTAGCCC GCCACAATAT TCCCACCGCC
GCTTATGGCA ACTTTATTGA TATTGCTGCT GCTAAAGCTT ATGTTTCTCA AGTGACTGAA
AAAACAGGCT TCCCAATCGT TATTAAGGCC GATGGTTTGG CGGCGGGCAA GGGCGTAATC
ATAGCCCAAG ATAAGAGTGA GGCTGATGCA GCCATTGATG ACATGCTCGC CGGTAACAAG
TTTGGTGAAG CAGGCTCTCG AGTGGTAGTT GAAGAGTTTT TAACTGGCGA AGAGGCAAGC
TTTATCGTGA TGGTGGACGG TAAAAATATC CTTGCCATGG CGACCAGCCA AGACCATAAA
GCCCGTGACA ATGGCGATAA TGGCCCCAAT ACTGGCGGCA TGGGCGCGTA TTCACCGGCG
CCTGTAGTGA CTCAGACAGT GCATGATTGG ACCATGAATA ACGTTATTCG CCCAACAGTG
GATGGCATGG CCGCAGAAGG CAATGTCTAT AAAGGCTTCT TGTATGCTGG CCTTATGATA
GCCCCAGATG GCAGCGCTAA AGTATTAGAA TATAACTGCC GCTTTGGCGA CCCTGAAACC
CAGCCGATTA TGATGCGCCT TAAGTCTGAC TTGGTTGAGT TATGTCTTGC CGCTACCCGT
GGTGAGCTAG ATAAGGTCAC TGCCGAGTTT GATGAGCGCC CAGCCGTTGG CGTGGTGATG
GCTGCTGGTG GTTATCCCGA TGCCTACCGC AAAGGTGATG TGATAGCAGG GTTAAGCCTT
GGTGACAATC AGGGCAAGGT GTTCCATGCA GGCACAGCAA CCCAAGATGG CCATGTTGTT
ACCCATGGCG GTCGAGTGTT ATGCGCCACC GCCCTTGGCA ATAGTGTAAC CGCAGCGCAA
AAAGCCGCCT ATGCCTTAGT GGAAACCGTG CATTGGGATG AGGTGTATTT TCGCACCGAC
ATCGCCTATC GGGCCATTGC TCGAGAGCAA CAAGCTTAA
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| Protein sequence | MKVLVIGGGG REHALAWKAA QSPQVDKVFV APGNAGTALE PKLENVAIEV TDIQALVAFA
KDNHIELTIV GPEVPLVLGV VDAFNLANLP IFGPTQGAAQ LEGSKAFTKD FLARHNIPTA
AYGNFIDIAA AKAYVSQVTE KTGFPIVIKA DGLAAGKGVI IAQDKSEADA AIDDMLAGNK
FGEAGSRVVV EEFLTGEEAS FIVMVDGKNI LAMATSQDHK ARDNGDNGPN TGGMGAYSPA
PVVTQTVHDW TMNNVIRPTV DGMAAEGNVY KGFLYAGLMI APDGSAKVLE YNCRFGDPET
QPIMMRLKSD LVELCLAATR GELDKVTAEF DERPAVGVVM AAGGYPDAYR KGDVIAGLSL
GDNQGKVFHA GTATQDGHVV THGGRVLCAT ALGNSVTAAQ KAAYALVETV HWDEVYFRTD
IAYRAIAREQ QA
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