| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3405 |
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| Symbol | |
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| ID | 4019953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 4060933 |
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| End bp | 4062408 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637957457 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_564403 |
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| Protein GI | 91794752 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.190303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCGC ATACTCATAA GCGTCCCACC TTGCTCGATG CATTAATCCC TATCATAGCG
CTGGTTGCCA TGCTGGTTGC TGCCGTGTAT TTGTTTTCAT CGGACAGTTC ATCGGGTGCT
AACCAAATCG CGCTTATTCT GGCGGCCTGT ATTGCAATCG TCATAGGTTA TAAGAATGGC
TACAGCTGGA ACGAGATGGA AAAGGGCGTA GTACGCAGTG TGGGCGTCGC CACCGGCGCC
TTGTTGATTT TATTCAGTGT CGGCTCCTTG ATTGGCACCT GGATTTTATC CGGCACTGTG
CCCACCATGA TTTTTTATGG CATGAAAATT TTAAACCCTG ATTATTTCTA TGCCGCCTCC
TGCCTACTTT GCGCCGTAGT GGCCTTAAGT ATCGGCAGTT CTTGGACCGT CGCGGGCACT
TTAGGTATTG CGCTGGTGGG TATTGCCTCT GCCATGGGGC TAAGTGTTGA AATGACAGCC
GGCGCCATCA TCAGTGGCGC TTATTTTGGC GATAAGATGT CGCCCATGTC CGACACCACT
AACCTAGCGC CAGCGGTGGC GGGCACAGAT ATTTTCAGTC ATATCCGCCA TATGACTTGG
ACCACAGTGC CCAGCATCAT CATTGCCTTG ATTGGATTTT TATTCTTAGG GCTAAATGCC
GAGGCCACCC CAATTGAAAC CAGCTTAGCT GAAACCTTGG ACTTAATCGA TCGTACCTAT
CAGCCTGGGG TGCATTTACT CTTTCCATTA TTGGTGGTGC TGTTTCTCGC CTTTAAGAAG
ATGCCCGCCT TTCCCACCGT GATTTTAGGC ACCTTAGCAG GGGCGGCCTC GGCAGCAATT
TTTCAATTCG ATAACGTGGT GAGCTTTGTT CACGATGACA GCTTGCCGCC CATGGTCGCC
TTAGTAAAAG GCATCTGGAT TGCCATGTTC GATGGCTATG TGGCCAACAC AGGCGATGCG
GTATTAGATA GCCTGTTAAG CCGAGGCGGC ATGAGCAGCA TGGTGACCAC GGTATGGTTA
ATTCTGTGTG CCATGGCCTT TGGCGGCGTG ATGGAAGTCA CGGGTTTACT GGCGCGTATT
TTGGAAAACA TTCTTAAATT AGTGACGGGG ACCAGCAGCC TTATTATCAC CACATTAGCC
TGCTGTATCG GCGCCAACAT CATCACAGCG GATCAGTTTA TCGCCATCGT CTTGCCAGGG
CGTATGCTAA AGCTGGAGTA CACTAAGCGT AAATTAGCAC CGGTCAACTT AAGCCGCGCC
CTCGAGGATT CGGCCACTAT CACGAGCCCC TTAGTCCCAT GGAATACCTG TGGTGCCTTT
ATGGCCAGCA CCTTAGGTGT GGCCACCATT GCTTATTTAC CTTATGCCTT CTTTAATCTG
GTTTGCCCTT TTGTTAGTGC AGGTTATGCT TACTTTAACT TCAAAATAGA GCCATTAGTT
GAAAGCGAAT CGCCAACGGC AGAAGCGGCG GTTTAA
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| Protein sequence | MPAHTHKRPT LLDALIPIIA LVAMLVAAVY LFSSDSSSGA NQIALILAAC IAIVIGYKNG
YSWNEMEKGV VRSVGVATGA LLILFSVGSL IGTWILSGTV PTMIFYGMKI LNPDYFYAAS
CLLCAVVALS IGSSWTVAGT LGIALVGIAS AMGLSVEMTA GAIISGAYFG DKMSPMSDTT
NLAPAVAGTD IFSHIRHMTW TTVPSIIIAL IGFLFLGLNA EATPIETSLA ETLDLIDRTY
QPGVHLLFPL LVVLFLAFKK MPAFPTVILG TLAGAASAAI FQFDNVVSFV HDDSLPPMVA
LVKGIWIAMF DGYVANTGDA VLDSLLSRGG MSSMVTTVWL ILCAMAFGGV MEVTGLLARI
LENILKLVTG TSSLIITTLA CCIGANIITA DQFIAIVLPG RMLKLEYTKR KLAPVNLSRA
LEDSATITSP LVPWNTCGAF MASTLGVATI AYLPYAFFNL VCPFVSAGYA YFNFKIEPLV
ESESPTAEAA V
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